Littorina saxatilis: 138983059
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Entry
138983059 CDS
T10665
Name
(RefSeq) antiviral innate immune response receptor RIG-I-like
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lsax04054
]
138983059
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138983059
Pattern recognition receptors [BR:
lsax04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
138983059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
138983059
NCBI-ProteinID:
XP_070212563
LinkDB
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Position
LG12:28152968..28173048
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AA seq
675 aa
AA seq
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MIRNHLEQERPGVRRAVFLVNNRALAEQQYRQYFVKYLSNFRITLVVGGDGATASLNQLL
NSADIFVMTAQILLNALEQKEIDGIHEFSLVVFDECHHTQLKHTYNRIMHHYMALKFQGK
DGSADVRVPRLPVQVVGLTASVGVGNARTPTEAEEHVMKLCAHLDTEHISTVQENLEQLH
SRTNKPVHQRAECGTRPNDKFHTMIREIMTKIEESIEHSEYVDSDVTGGLQARMRQKPHQ
RGSCQYTNWISELLRTVTLLPDGQACRALKPCCDMLKIYNDSLLINDECDTEDALNFLDQ
QMSDYDPTGQRNTQTDRFLKDLFQTNKSNLTVVSKEQADTNPKLNVIEDKLIKTFEETAD
SRAVLLVQTREQADIMLRWLRRRPWLHRLNVKPEKMVGACASADKGGMTDTQQKDVLDNF
REGRYNVLVATSIAEEGLHFPSCNLVTLVNHVTNEIAYMQARGRARAENSEFFIVAGENK
GVQQKAKDLDIGEMMMHEAVRQVQALGKQNHVQFLEQLYQIQEKEKKERDAELTLRQNRH
LEQGEVEFHCVLCNEFAFRSSDVRRIDNNHYVVIDLDYCRRHTERMHPPQLLGRIQNVGR
LYCNGCEEYRGPILVYRKLKFPCVKLEGFRYTNASGEKNVAKKWGKTKLVVKEMTDNELD
QYRKKAVEIGYVFKS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgattcggaaccaccttgagcaagagcgtccaggggttcgcagggcggtgttcctggta
aacaaccgagcactcgcggagcagcagtacaggcagtattttgtcaagtacctcagcaac
tttcgcatcacacttgttgtcggcggcgacggggcgacagcttcgttaaatcagctgctc
aacagtgctgatatatttgtgatgacagcccagatcttgttgaacgccctggagcagaag
gaaattgatggcatccatgagttttccttggtggtgtttgatgagtgccaccacacgcag
ctgaagcacacgtacaaccgcatcatgcatcattacatggccctcaagtttcagggtaaa
gatggaagtgcagatgtgagagttccgcggctacctgtgcaggtggttggcttgacagcc
tcggtgggtgtggggaatgcacgtactccaacagaggcagaagagcatgtcatgaaactc
tgtgctcatctagacaccgagcacatcagcactgtccaggaaaaccttgaacagcttcat
tccagaaccaacaagcctgttcatcagcgggcagaatgtggcacacggcctaacgacaaa
tttcacaccatgatccgagaaattatgacgaagatcgaagaaagtattgaacattctgaa
tatgttgacagtgacgtaacaggcggtctgcaggcaaggatgagacagaagccacaccag
aggggaagctgccagtacaccaactggatatctgagctcctgaggactgtcacactgctg
cctgatggacaggcatgtcgggcgctcaaaccctgctgcgatatgctcaaaatttacaac
gattctctgttaatcaacgacgaatgtgacacagaagacgcactgaactttcttgaccag
cagatgagcgactatgaccccaccggacaacgtaacacccaaactgaccgcttccttaag
gaccttttccaaacgaacaagtcgaacttgacagttgtgagcaaagaacaagccgacacc
aaccccaaacttaacgtcattgaggacaaactcataaagacatttgaggagacagcggac
tcccgggctgtgttgcttgtgcaaaccagagagcaggctgacatcatgcttagatggcta
agacgaaggccttggcttcacagactcaacgtcaagcctgagaaaatggttggtgcctgt
gcctctgctgataagggaggaatgactgatacccagcagaaagatgtccttgacaatttc
cgtgaaggtcgttacaacgtgctggtggcgacctctatcgccgaggaaggtctgcacttt
ccatcctgtaacctggtcacccttgtcaaccatgtcaccaacgaaattgcttacatgcag
gccagaggtcgagcacgtgcagaaaacagcgagttctttattgtggctggtgagaacaag
ggagttcagcagaaggcgaaggacctggacattggagagatgatgatgcacgaagctgtc
agacaagtccaggccctcggtaaacaaaaccatgtgcagttcctagagcaactgtaccag
atacaggaaaaggagaaaaaggagcgtgatgcagagctgaccctccgccagaacagacat
cttgagcaaggggaggttgaattccactgtgtgctgtgtaacgagtttgccttcaggtcc
tcagatgtaaggcgaatcgacaacaaccactacgtggtcatagaccttgactactgtcgc
aggcacacggagcgaatgcatcctccacagctgctaggcagaatccagaacgttggaagg
ctctattgcaatggatgcgaagagtaccggggccccatactagtgtaccgtaagctgaag
ttcccttgtgtcaaactggagggctttcgctacaccaacgcgtcaggagaaaagaacgtt
gccaagaaatgggggaaaaccaaactggtggtgaaggaaatgacagacaacgagctcgat
cagtaccggaaaaaagctgttgaaattggatacgtgttcaagtcctga
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