Littorina saxatilis: 138983731
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Entry
138983731 CDS
T10665
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
lsax03015
mRNA surveillance pathway
Brite
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138983731
5.6.2.5 RNA 5'-3' helicase
138983731
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138983731
mRNA cycle factors
Common to processing body (P body) and stress granule
138983731
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138983731
NCBI-ProteinID:
XP_070213143
LinkDB
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Position
LG1:90266930..90303315
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AA seq
1111 aa
AA seq
DB search
MSVDAYGPNSQTLTFLETEDGADLLGADTQGSEFEFTDFTLPSQTQSQTQASQIDLQSQS
QVNGPEIPNQNGVDLSINPITQGVGELNFEEEEEDQFYMKDLPKYACAYCGIHDPACVVY
CNTSKKWFCNGRGNTSGSHIINHLVRAKAKEVTLHKDGPLGETVLECYNCGCRNVFLLGF
IPAKADSVVVLLCRHPCATLSNLKDMNWDPSQWQPLIQDRQFLSWLVKVPSDQDQMRSRQ
ISAQQINKLEELWKENPDATLEDLQKPGVDEEPAQVLLRYDDAYQYQNIFGPLVKLEADY
DKKLKESQTQDNMSVRWDLGLNKKRIAYFHMPKANDEMKLMHGDELRIRYIGELHKAWSG
VGHVIKIPDNYSDEVAIELKSNAGVPNECTHNFVVDFVWKSTSFDRMQAAMKTFAVDETS
VWGYIYHKLLGHEVEDVVLKCTLPKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQGPPGT
GKTVTSATIVYHLVKQNSGPALVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREAIDSPV
SFLALHNQIRSMDSVPELSKLQQLKDETGELSSTDEKRYRALKKQCEKELLQAADVICCT
CVGAGDPRLAKMQFRSVLIDESTQATEPECMIPVILGCRQLILVGDHCQLGPVVMCKKAA
RAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERLRKSLD
FPWPQPDKPMFFYCTNGQEEIASSGTSYLNRTEAANAEKLVTRFLRSGVKPEQIGIITPY
EGQRAYQVQYMQYSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDP
RRLNVALTRARYGIIIVGNPKVLSKQPLWNHLLTYYKEQKCLVEGPLSNLKESLIQFSKP
RKLINSTNPGGRFMSNTMFDARELLVPGSVYDRGMPYREPVVHTHDQLNFIGPERAYTRT
AMNLPVPVNMFLPQPVPQPFLNQHMPQDVGLQKGMAGNSWNQNRRQKPPRYSKHQQQQPM
QPNHHPSQPSQHSQEVSQGFSQGPLTQGMSMSQAFPMSQPGMSGLSQAELSQDSFMADDF
KSQMDGMLSQDSTYQGDRHFYASQLSQGPFN
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgatgcatatggcccgaattcgcaaacgcttaccttcctggaaacagaggac
ggagccgaccttttgggcgcagatacccaaggttccgagttcgaattcacagacttcacg
cttccttcgcaaactcagtcgcaaactcaggcgtctcagattgatttgcagagtcaaagc
caggtgaatggacctgagatacctaatcagaatggagtggacctttccatcaacccaatc
acgcagggagtgggagagctcaactttgaagaagaagaggaggaccaattttacatgaag
gatctgccaaaatatgcatgcgcatattgtggaatccatgaccctgcttgtgtggtttac
tgtaacacctccaagaaatggttttgcaatggtcgtggcaacacttctgggagccacatt
atcaaccacctggtgcgagccaaagccaaagaggtgacgcttcacaaggatggccccctg
ggagagactgtgctggagtgttacaactgcggctgtcgcaacgtcttcttgctgggcttc
atccccgccaaggccgactctgtggtggtgctgctgtgtcgccatccttgcgccaccctc
tccaacttgaaggacatgaactgggatcccagccaatggcagccgctgattcaggatcgg
cagttcctgtcgtggctggtgaaggtgccgtctgaccaggaccagatgcgtagtcgtcag
atctcggcccagcagatcaacaagctagaggaactgtggaaagaaaatcctgatgccact
ctggaagatcttcagaaaccgggtgttgatgaagagcctgcacaggtgttgctcaggtat
gacgatgcctaccagtaccagaacatcttcggccccctggtgaagctggaggcagactac
gacaagaagctgaaggagtcgcagacccaggacaacatgtctgtgcgctgggacctcggc
ctcaacaagaaacgcattgcatacttccacatgcccaaggctaacgatgagatgaagctg
atgcacggtgatgagctgaggattcgctacataggagagctgcacaaggcatggtctggg
gtgggccacgtcatcaagatccctgacaactacagcgatgaggtggccatagagctgaaa
agcaatgctggggtccccaatgagtgcacccacaattttgttgtcgactttgtctggaag
tcaacttcgtttgacaggatgcaggcggcgatgaagacatttgcggtggatgagacctcg
gtgtggggctacatctaccacaagctgctgggccatgaggtggaggatgtggtgctcaag
tgcacgctgcccaagagattctccgctccgggtctgccagagctcaaccactctcaggtc
tacgccgttaagactgtgctgcagagacccctcagtcttattcagggtcctccaggcaca
ggtaaaacggtgacgtcagccaccattgtgtaccatctggtgaagcagaacagtgggcct
gccttggtctgtgctccttccaacattgctgtggaccagctgactgagaaaatccacaaa
actggactcaaggtggtgcgactgtgcgccaagagtcgtgaagccatcgactcacccgtg
tctttcctggccctgcataaccagattcgcagcatggacagtgtacctgaactgtccaag
ctgcagcagctgaaggatgagacgggagagctgtcctccactgatgagaaacgctacagg
gctctcaagaagcagtgtgagaaggaactgctgcaggcagctgatgtgatctgctgcacg
tgtgtgggcgctggggaccctcgcctggccaagatgcagttccgctctgtgctgatcgat
gagagcacgcaggccacggagccagagtgcatgattcctgtcatcctgggctgtaggcag
ctgatcctggtaggagaccactgccagctgggccccgtggtgatgtgcaagaaggcagcg
cgggcgggactgtcgcagtcgctgtttgagcgtctggtggtcctgggcatccgccccatc
cgtctgcaagtgcagtaccgcatgcaccccgccctctctgccttcccctcaaacatcttc
tacgaggggtcgctgcagaacggtgtcactgctgcggagcgtctacgaaagagtctggac
ttcccttggccccagccagacaaacccatgttcttctattgcaccaacggtcaagaggag
attgctagctctggaacatcctacctgaacagaactgaagcagccaacgcagagaagctg
gtgactcgcttcctgcgctctggagtaaaacctgagcagattggaatcatcactccgtac
gagggccagcgcgcgtaccaggtgcagtacatgcagtactcgggctccctcaacaagaag
ctgtaccaggagattgaggtggccagtgtcgacgctttccaaggccgtgagaaggacttc
atcattctctcctgtgtgcgctccaacgagcatcaaggcatcggcttcctcaacgacccg
cgacgtctcaatgtggctctgacacgagccaggtacggcatcatcatagtgggaaacccc
aaggttctgtccaagcaaccactgtggaaccatctgctgacgtactataaggagcagaag
tgtctggtggaggggccgctcagcaacctgaaggagagtctcatccagttcagcaagcct
cgcaagctcatcaactccaccaacccgggaggacgtttcatgagcaacaccatgtttgac
gcccgtgagctgctggtgcccggcagtgtctatgacagaggcatgccataccgagagcca
gtggtgcacacccacgaccagctcaacttcatcgggccggagcgcgcgtacacccgcacc
gccatgaacctgccggtgcctgtcaacatgttcctgccccagcctgtgccacagcccttc
ctcaaccagcacatgcctcaggatgtggggctgcagaagggaatggcaggcaacagctgg
aaccagaaccggcgccagaaaccgccgcgctacagcaaacaccagcaacagcaacccatg
cagcccaaccaccacccatcccagccctcccagcacagccaggaggtgtctcagggattc
tcccagggcccgctgactcaaggcatgtccatgtctcaggccttccccatgagtcagccc
ggcatgagtggtctctcccaggctgagctctcacaggacagcttcatggcggatgacttc
aagtcacagatggacggcatgctgtcccaggattccacctaccagggcgaccgccatttc
tacgcctcacagctctcacagggccccttcaactag
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