Lacticaseibacillus styriensis: LACSTY_000524
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Entry
LACSTY_000524 CDS
T10276
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lsb Lacticaseibacillus styriensis
Pathway
lsb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LACSTY_000524 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsb02000
]
LACSTY_000524 (abc-f)
01504 Antimicrobial resistance genes [BR:
lsb01504
]
LACSTY_000524 (abc-f)
Transporters [BR:
lsb02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LACSTY_000524 (abc-f)
Antimicrobial resistance genes [BR:
lsb01504
]
Gene variants
Macrolide resistance genes
Transporters
LACSTY_000524 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_29
AAA_22
AAA_16
AAA_28
AAA_15
Dynamin_N
NACHT
MMR_HSR1
ABC_tran_Xtn
TsaE
RsgA_GTPase
AAA_30
nSTAND3
FtsK_SpoIIIE
PduV-EutP
DUF5906
DUF815
ORC-CDC6-like
DUF87
DUF5615
Motif
Other DBs
NCBI-ProteinID:
WLV81334
UniProt:
A0ABY9LCH0
LinkDB
All DBs
Position
complement(572772..574259)
Genome browser
AA seq
495 aa
AA seq
DB search
MSTIQIKHLYFAYDGQAPLFSDAGFNLDTGWHLGLVGRNGRGKTTLLRLLQQQLDYRGTI
TVPMPLRYFPQALDESQLTLHAAQAFQDVAQWQLERELNLLHADPDILWRPFRDLSGGEQ
TKVRLALLFIQDDGFALIDEPTNHLDLRSRRQVAAYLKQKPGFIVVSHDRDFLDAVTDHT
LAIERQKITLYQGNYTTFTTEKQRQDQTELAQNAQLKTEISRLKQTAHAKKVWAENKERS
VYGKRHEKDSGHNNTRGFISARAARTMKKSKNLEHRMDKEIAAKEQLLKNLEKVDPLTMA
PQPTHHHHLIVAENVQVGYDQPLFQPISFTLHPGDRVAIVGENGSGKSTLIRALLGHFTG
NQTGLLTLAPVALSLVRQQYPDNRGLLPDFAEKRHLNLEILLNNLRKLGMPRADFATPIE
YLSMGQQKKVEVARSLATPASLYIWDEPLNYLDTYNQDQIMAAITRYQPTMLFVEHDEHF
INKIATKVVRLTPLT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattcaaatcaaacacctttattttgcctatgacggccaggcgccacttttc
agcgatgccggatttaacctcgatactggttggcaccttggcttagttggccgtaacggt
cgtggtaaaaccacgttgctgcggttattgcagcagcaactggattatcgcggaacgatc
acggttcccatgcctttgcgctattttccgcaagcgctggacgagagccaactgacgctt
cacgcagcgcaagcctttcaagacgtggcgcaatggcaactggaacgcgaactaaattta
ttgcatgccgaccctgatatcttgtggcggccgtttcgagatctatctggcggtgagcaa
accaaggtccgcctcgccttgctcttcatccaagacgatggctttgcactcattgacgag
ccgacgaatcacctcgacttgcgcagtcgtcgccaagtcgctgcctacctaaaacaaaag
ccgggcttcattgtggtcagtcacgaccgggattttctcgacgctgtcaccgaccatacg
ctggctatcgaacgccaaaaaatcacgctttaccaaggcaactacaccacctttaccacg
gaaaagcagcggcaggatcaaaccgagctcgcgcaaaatgctcagttaaaaactgaaatc
agccgcttgaagcaaactgcccacgccaaaaaagtttgggcggaaaacaaagaacgcagc
gtttacggcaagcgccacgaaaaagatagcgggcacaataacacccgcggcttcatcagc
gcccgggcagcaagaaccatgaaaaaaagcaaaaacctggaacaccgcatggataaggaa
attgcggcaaaagaacagttgcttaaaaatttggagaaagtcgatccactcaccatggcg
ccacaaccaacccatcatcaccatttgattgtggccgaaaatgttcaggtcggttatgat
cagccgcttttccagccaatttcatttacgttgcaccccggcgaccgagtggcgatcgtc
ggtgaaaatggcagcggtaaatcgacgttgatccgtgctttgctaggacattttaccggc
aatcaaaccgggcttctgaccttggcgccggttgctttgagtctggtacgccagcaatac
cctgacaatcgcgggttactgccggactttgccgaaaagcggcacctcaacctcgaaatt
ttgcttaacaacttgcgtaagctcgggatgccgcgcgccgattttgccacgccgatcgaa
taccttagtatgggccagcaaaagaaagtcgaagttgcgcgttcgcttgcaaccccagcc
tccttgtatatttgggacgagccgctcaattatctggacacttacaatcaagaccagatc
atggccgcgatcacccgctatcaaccaacgatgctatttgtggaacacgatgagcatttt
atcaataaaattgccacgaaagttgtccgcctgacgccactaacctaa
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