Lacticaseibacillus styriensis: LACSTY_000672
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Entry
LACSTY_000672 CDS
T10276
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lsb Lacticaseibacillus styriensis
Brite
KEGG Orthology (KO) [BR:
lsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsb03019
]
LACSTY_000672
03009 Ribosome biogenesis [BR:
lsb03009
]
LACSTY_000672
Enzymes [BR:
lsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LACSTY_000672
Messenger RNA biogenesis [BR:
lsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LACSTY_000672
Ribosome biogenesis [BR:
lsb03009
]
Prokaryotic type
rRNA helicases
LACSTY_000672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
CMS1
PRA-PH
Motif
Other DBs
NCBI-ProteinID:
WLV81472
UniProt:
A0ABY9LCK8
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All DBs
Position
729128..730474
Genome browser
AA seq
448 aa
AA seq
DB search
MENQFKQYQIKPFVIAGLDAMGITQPTPIQKKVIPALLRGENLVGQSQTGSGKTHAFLVP
LLSMVDPEQDATQVVITAPSRELANQIYAVAQQLTQTEPAIRISRLVGGMDKQKQIDKLQ
HHQPHVAIGTPGRILDMIKRYDLVPASVRHFVVDEADMTLDMGFLETVDAIASSFPENLQ
MAVFSATIPQKLEPFLRKYMHHPTMIELKPQSVIADTVENILIAAKGQDKNELIYQLVTM
GHPFLVLIFANTKTSVDAIHDYLKHQGLKVAKIHGGIQPRERRRIMKEVADLKYQYVVAT
DLAARGIDIKGVSMVINAEIPRDLEFFIHRVGRTGRNGMAGTAITLYEPGQEDQVAELEH
MGIKFAPKTLHKGELVDTYDRNRRVHRKPKQEETSLAMRGLVKKAKQKHMPNYRKKIRTA
ALLERKRNAKVARRQALLAEKRKNRKRG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaatttaaacaataccaaatcaagccgttcgtgatcgccggccttgatgct
atggggatcacgcaaccgacgccgattcaaaaaaaggtgattccggccttattgcgcggg
gagaatcttgtgggtcagagtcagacaggcagcgggaaaacccacgcttttttggtaccg
ttgcttagcatggtcgatcctgaacaggatgcaactcaggtggtcatcacggcaccgtcc
cgcgagctggccaatcagatttatgcggttgcccaacaactgacccaaacggagccagcg
attcggatcagtcggttagtcggcgggatggataagcaaaagcagattgacaaactgcag
catcatcagccacatgtagccattggcacaccggggcggattctagatatgataaaacgt
tatgatttagtgccggcttcggttcggcattttgtcgttgatgaagccgatatgacgttg
gacatgggttttctggagactgtcgatgcgattgcgtccagttttccggagaatttgcag
atggctgttttttccgccaccattccgcaaaagctcgagccgttcctgcgtaaatacatg
catcatcccacgatgattgaactcaaaccacagtctgtcatcgccgataccgttgaaaat
attctgattgctgctaaaggacaggataaaaacgaactgatttatcagcttgtcacgatg
ggtcatccgtttctggtgttaattttcgccaataccaaaaccagtgtggatgcgattcat
gattacctgaaacatcaagggttgaaagttgccaagattcatggcggcatccaaccgcgt
gaacgtcggcgcattatgaaagaagtggccgatcttaaatatcaatacgtagttgcaacc
gatttggctgcgcgtggcattgatattaaaggggtttcgatggtgattaatgccgagatt
ccgcgagacctggagttctttattcatcgagtagggcggactggacgaaacggcatggcc
gggacagcgatcacgctttacgaaccgggacaagaagatcaggttgccgagttagagcat
atgggcatcaagtttgcgcctaagacccttcacaaaggcgaattggtcgacacgtatgac
cgaaatcggcgcgttcaccgtaagcctaagcaggaagaaacgagtctggcgatgcgcggc
ttagtcaaaaaagccaagcaaaagcatatgccaaactatcgtaagaagattcgcactgct
gccttattggaacgcaaacggaatgccaaagttgcccgtcgccaagccttattagccgaa
aaacgtaaaaaccgcaaacgaggataa
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