Lacticaseibacillus styriensis: LACSTY_001456
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Entry
LACSTY_001456 CDS
T10276
Name
(GenBank) deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lsb Lacticaseibacillus styriensis
Pathway
lsb00240
Pyrimidine metabolism
lsb01100
Metabolic pathways
lsb01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lsb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LACSTY_001456
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lsb02044
]
LACSTY_001456
Enzymes [BR:
lsb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LACSTY_001456
Secretion system [BR:
lsb02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LACSTY_001456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
SNAD4
APOBEC2
Bd3614-deam
XOO_2897-deam
APOBEC_N
NAD1
APOBEC3
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
WLV82176
LinkDB
All DBs
Position
complement(1519186..1519650)
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AA seq
154 aa
AA seq
DB search
MTDKIVPSKRKVHRESWDHYFLELAQQVSERSTCERATVGAVLVQEHRIIATGYNGAISG
DPHCDEAGHLMRDGHCIRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAG
IKRIVYAHDYRNDPYGEALLKQHHLDVLHLAPQD
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
ttgacagataaaattgtgccatctaaacgaaaggttcaccgtgaaagttgggatcattat
tttctcgaactcgcgcaacaagtttcggaacggtcaacttgtgagcgggccacggttggc
gctgttttagtgcaggaacaccgcattattgccacaggctataatggcgccatcagtggc
gatccgcattgtgatgaggcagggcacttaatgcgtgacggccactgcattcgcacgatt
cacgcagagatgaacgcaattatccaatgcgcagccaacggtgtcagtacccacggcgca
accgtttacgtgaactttttcccgtgtctgaattgcaccaaagctttgattcaagccggg
attaagcgcattgtttacgcgcacgactatcgcaatgacccatatggtgaggcgttgtta
aaacaacatcatttggatgtcttacatttagcaccacaagattaa
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