Lacticaseibacillus styriensis: LACSTY_001464
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Entry
LACSTY_001464 CDS
T10276
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lsb Lacticaseibacillus styriensis
Brite
KEGG Orthology (KO) [BR:
lsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsb03400
]
LACSTY_001464
Enzymes [BR:
lsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACSTY_001464
DNA repair and recombination proteins [BR:
lsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LACSTY_001464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF4124
Motif
Other DBs
NCBI-ProteinID:
WLV82184
LinkDB
All DBs
Position
complement(1530789..1534328)
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AA seq
1179 aa
AA seq
DB search
MGLQFILGDATRDHAQTMAAMIQEQLAADPQNQIFFLVPNHIKFEAEIDLLKRLRQLQQG
EADAYAQSRVQVLSFSRLAWFYLKNTPLYQQPRLDQASNTMLVAKILADRQDDLTIYAGE
AQHTGFVTQLADQLSELMIGRITAEDLMHTVSALAPGDRHRAKLRDLGIILDQYEAEIGP
YATTASLLSGLQQAMRTQDLSHTFIYLNDFNVFSASESALVETMLETAAEVTLGLVLNKP
YPLNPPVAPNLFLPAGRLYQRLYQKAKTLHVPIRPDRFAAPRQISRGMQQVANWWEANTD
LQPSTAPTSETGEQIHLAIATDPYQELRHVAQHIYRAVRHGARYRDFLILARRLEPYATV
IPAIFAEFSIPQFTDLQRPMKDHPLVVLMESLFAIQKHDYQYQDVMRLLHTELLLPEGMS
LAEFRDAVDTTDNHLVRTGIAGKQRWTQPAAWRYFQRNPDADDPQMDPEAAKTAQINAIK
TLIAQTVPTLLKQWQTAKTGAEAAGDLYRWLDANGVVDQLRAWRQTASDAGDLTRNRAHE
QAWTTFTALLDDYVTILGSAKFDREQFHELLAAGFASATYTQIPATLDAVVISETGLVRL
AKAKHVFVIGATNTAMPDVPTDDGVLNSEERQLLAAQLPDDRFLPEQGPATTLGDPFINY
LGFMAASDELTLSYPVQNAQENSENQASPYFQQMGNALHLTPTAWAPVSLTTPVETVLGS
PRAMLSDFVRTAGDAQQQKLPLGQAWQSVLAALKQTDLATLSRRLAGSLTYQNDPGRLDP
DLAIQLYGRDMNVSVSRLETYYLNHFEYFLKYGLLLQPRPEFELSPADTGSLFHAVLDRY
LTQLREEHVALADVDPAVIAAAIPPLVEDIASQPGYEILGSTHRMLYLTRRLSRLLIQVL
VNMRQQQQRSGFRPLRTELQFGRIGDTKGLPGLSWPLPHGGRVNVRGKIDRLDVYREPNA
RRFIIVDYKSTQHRFNDSDAYYGIALQMLTYIEAMTNVPVDPPFVPAGALYFHLQDPTLQ
YTPTLEPVIERLKKFKYLGFLVANHGDELAAVDRTISPESGGASEVAPLGFKKDGSFNRS
QSNILTPDDLRAYLAHNQALIIDAATQILSGNIDLAPFQYGQSSEVVSRSDYQSIMLFDP
ATGFDHYHHVPKLKRKDVVNRLTTDPKQTPDSKKETPQS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcagtttattttaggcgacgcaacaagggatcatgcccaaaccatggcagct
atgatccaggaacaactcgcggctgatccgcaaaatcagattttctttttagtgccgaac
catattaaattcgaagcagaaatcgatcttctcaaacgcttgcgccaattgcaacagggt
gaggcggatgcgtacgctcagagtcgggtgcaggtactgtcattttcgcgtctggcctgg
ttttatttgaaaaacacgccactttatcaacaaccacggcttgatcaggcaagcaatacc
atgttggtggccaaaattctggctgatcggcaagacgacttgaccatttatgccggcgaa
gcgcaacataccggttttgtgacgcaacttgccgatcaactaagcgaattgatgatcggc
cgcatcacggccgaagatctgatgcatacggtatcggctttagctcccggtgatcggcat
cgcgcgaagttgcgcgatttgggaatcattcttgaccaatatgaagcagaaatcggccct
tatgccacgaccgcaagtttactgagtggcttgcagcaagccatgcgcacgcaggaccta
agccatacgtttatctatctcaatgattttaacgtattttctgcttccgagtccgcgtta
gtcgaaaccatgctcgaaacggccgccgaggtaacgctcgggttagttttgaataagccc
tatccgcttaatccgcctgttgctcccaacttatttttacccgctggccgactttatcaa
cggctttatcaaaaggcgaaaacgctgcatgttccgattcgcccggatcgatttgcggca
cctcgtcaaatcagtcgcggcatgcaacaagttgcaaattggtgggaggccaatacggac
ctgcaaccatcaacagctccgacttctgaaaccggtgagcaaattcatctggccatcgcg
accgacccgtatcaggaactgcggcatgtggctcagcacatttatcgcgcagttcggcat
ggtgcgcgctatcgtgatttcctgattttagcacgacgattggaaccctatgcaaccgtg
attccggcgatttttgccgaattttcgatcccgcagtttactgatttgcaacgaccgatg
aaggaccatccgctagttgtcctgatggaaagtctgtttgcaattcaaaaacacgattat
cagtatcaggatgtcatgcgtctactacacacagaactattgttgccggaagggatgtca
ctggccgaatttcgggatgcagtggacacaacggataaccacctagtgcggacgggcatt
gccgggaagcagcgctggacgcaaccagctgcatggcgctattttcagcgcaatcctgac
gccgatgatccgcagatggatccggaagctgctaaaaccgcgcagatcaatgcgattaaa
acgttgatcgcccaaaccgtcccaacgttgctaaaacagtggcagaccgcaaaaacaggg
gcggaggctgcaggtgacctgtatcgttggttggacgcaaatggcgttgttgatcaactg
cgcgcttggcgacaaactgccagtgacgccggtgatctgacccgcaaccgcgcccatgaa
caggcgtggaccacttttaccgcgttattggacgactatgtcacgatcttgggcagtgcc
aaatttgaccgggagcagtttcacgaattgctggccgcgggatttgccagtgccacgtac
acccagattccagcgacgcttgacgcggttgttatttctgaaaccggattggtgcggcta
gcgaaggcaaaacatgtattcgtcattggtgcaaccaatacggccatgccggatgttccc
actgatgatggcgtgttgaacagtgaggagcgccaattgttggctgctcaattgccggat
gatcgcttcttgcctgaacagggaccggcaacgactttaggcgatccatttatcaattac
ctaggcttcatggcagcgtcagacgaattgacgttgagctatccggttcaaaacgcccag
gaaaacagcgaaaatcaggcctcaccttattttcagcaaatgggaaatgcactgcaccta
acgccaaccgcctgggcgccggtttcgctgacaacgccagtcgaaaccgttttaggcagt
ccgcgggcaatgttgagtgactttgtgcgcactgctggtgatgcccaacaacaaaagctg
ccgttgggtcaagcgtggcaaagtgttttggcggcgttgaaacaaaccgatttggcaacg
ttatcccgccgcctcgccggtagcttaacctatcaaaatgatccggggcgccttgatccg
gatttagctatccaactttacgggcgggacatgaatgtgtcggtttcccggcttgaaact
tactatctgaaccactttgaatattttctcaagtacggcttgctcctgcaaccgcgcccg
gaattcgaactttcaccagccgacaccggcagcctgtttcatgcggtgctggatcgctat
ttgacccaactacgcgaagaacatgtggcactggcagacgttgacccagccgtcatcgct
gccgccattccgccacttgtcgaagacattgccagccagccgggctacgaaattctcggc
agcacgcatcgcatgctctatctgaccagacgtttaagccggctactgatccaagtactg
gtcaacatgcgccagcaacaacaacgcagtgggtttcgtccgctgcgcaccgaattgcaa
tttggacgaatcggggacaccaaaggcttgccggggttatcctggccgttgccgcatggt
ggccgcgtcaacgttcgcggcaaaatcgatcgcttagatgtttatcgtgaaccgaatgcg
cgccgctttatcattgttgactataagagtacccagcatcggtttaatgacagtgatgcc
tattacgggattgccttgcaaatgctgacgtacattgaagccatgacaaacgttcctgtc
gacccgccgtttgtcccggccggagcattgtattttcatcttcaggatccaacgcttcaa
tacacaccgacgttggaaccggtcattgagcggctcaagaaattcaagtatctgggtttt
ctggttgccaatcatggtgacgaactcgccgcggttgatcgcacgatttcaccggaaagt
ggcggcgctagcgaggttgctccgttagggtttaaaaaggatggcagcttcaaccgtagt
cagtcgaatattttaacgccggatgatttacgcgcttacttggcacacaatcaagcactg
atcatcgatgcggccactcaaattctctccggcaatattgacctggcacctttccaatac
ggtcaatcctcagaagtcgtcagtcgcagtgattaccaaagcatcatgctttttgatccg
gcaaccggctttgatcattatcatcatgttcctaaattaaaacggaaagatgtcgtcaat
cgcctcacaacggaccctaagcagacgccagattctaaaaaggagacaccgcaatcatga
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