Lacticaseibacillus styriensis: LACSTY_001516
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Entry
LACSTY_001516 CDS
T10276
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lsb Lacticaseibacillus styriensis
Pathway
lsb03410
Base excision repair
lsb03430
Mismatch repair
lsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LACSTY_001516 (recJ)
03430 Mismatch repair
LACSTY_001516 (recJ)
03440 Homologous recombination
LACSTY_001516 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsb03400
]
LACSTY_001516 (recJ)
DNA repair and recombination proteins [BR:
lsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LACSTY_001516 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LACSTY_001516 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LACSTY_001516 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WLV82272
UniProt:
A0ABY9LF36
LinkDB
All DBs
Position
complement(1580161..1582455)
Genome browser
AA seq
764 aa
AA seq
DB search
MTQYQWQLAAQPDPAAVQQLSQTLGVPAFLATLLWQRGIKDKSDYEAFVHPDISRLHDPF
ALHGMDKAVARILKAIEHNEKITIYGDYDVDGLTSSAIMLETLQSLGAEPDVFIPDRFAD
GYGPNAEVYAYLQKTGTQLVITVDNGVAGASVIDAAQEAGMDVVVTDHHELPANLPHAVA
VVHPRHPDGHYPFGDLSGAGVAFKVATALLGEPPLESVDLAALGTIADLVSLTDENRVIA
QLGLKMIQTQPRVGIAAILKEAGVAPETVNETTVGFVIGPRLNALGRMGDANPGVTLLTT
FEEDVAADLAQQVGKLNQERQGLVSKIATEALAMAQTPENQAAKTLLLAKKGWHEGVVGI
VASKVVEATGKPTLIMNIADDGMTAKGSGRSIEAYHLFNALEPVRDKMVAFGGHHMAVGL
TAKVEALPAIHAQMEAAAATMLKTVPKPTLPIAARLENDDLTLAHYELIRQLAPFGQGNP
EPTFSLRPQVIQNVKQIGKENTHLRFQVDNGINVIGFGFGEAAATLVDAQAVKLAVRLDQ
NTWQGNTSLQLMLKDYEVKQPQVIDWRMPSIDGGQFKSSRTYVFFDAKVKQQFERQFSFG
GPTLTAEQVTSPLANAVLVDLPQNRAQLRAVMQQIQPPVAIMFYGAPSHLVAIPTRVEFG
AVLHFLKAHPGFDKHYIPAIAKAVHLTVHQVILAIQVFFELDFVTIDGAFISPVTAPAKK
PLQTAKAYAAREEFLTLAQQLQTMPRAQLEAMLLTEHTDSEVES
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtatcagtggcaactcgccgcacaacccgatccagcagccgttcaacaatta
agccagacattaggcgtgccggcctttttggcgactttgttgtggcagcgcggtattaag
gataaatctgactacgaagcgttcgtacacccagacatcagccggctgcacgatccattt
gcgttgcacggcatggataaggcagttgcgcgaatcctaaaagcaatcgaacataatgaa
aagatcacgatttacggtgactatgacgttgacggcctgaccagcagcgccattatgctt
gaaacattgcagagccttggcgcggaacctgatgtgtttattccggatcgatttgctgac
ggttacggcccaaatgccgaagtttatgcctatttgcagaaaactgggacgcaactggtg
atcacggttgataacggcgtggctggcgcttctgtgattgacgccgctcaggaagccggg
atggacgttgtggtcacggatcaccatgaactacccgcaaacctgcctcatgcggtagcg
gtcgtgcacccgcggcatcctgatggtcattatccgtttggcgatctttccggtgccggc
gtggcgttcaaagtggcaaccgcactgcttggcgagccgccgcttgaaagcgtcgatttg
gctgccttagggacgatcgcggatttggttagtctaaccgatgagaatcgcgtcattgca
cagttgggtttgaaaatgattcaaactcagccgcgggtggggattgccgcaatcttaaaa
gaggcgggcgttgccccagaaactgtcaacgaaacaacagtcggctttgtgattggtccg
cgactgaatgcactaggacgcatgggcgatgcgaatcccggcgtcaccttgctgacgact
ttcgaagaagatgttgcggctgatctggcgcaacaggttggtaaattaaatcaggagcgc
caaggattggtcagcaagattgctacagaagcactggcaatggcacagaccccggaaaac
caggctgccaagactttgctgctggcgaaaaaaggctggcacgaaggcgttgtcgggatc
gttgccagtaaagtggttgaggcgactggcaagccgacactgattatgaatatcgccgat
gacggtatgactgctaaaggctcgggccgttcgatcgaggcgtatcatctttttaacgcc
ttagaaccggttagagacaaaatggtggcgtttggcggtcatcatatggccgttgggtta
acggccaaggtcgaggcactaccggcaattcatgcacagatggaggcggctgcagcaacg
atgctcaaaaccgtgccaaaaccgacactgccgattgctgcgcgtctggaaaatgatgat
ttgacgttagcgcattacgaattgattcgccaacttgcgccttttggccagggcaatccc
gaaccaaccttttcacttcggccgcaagtgattcaaaatgtgaagcaaatcggcaaagaa
aatactcatctccggtttcaggtagacaatggcattaatgtcatcggttttggctttggt
gaggccgccgcaacgctggttgacgcccaagccgttaagcttgctgtcagactggatcag
aacacctggcaaggcaatacgagcctgcaactgatgctaaaagattatgaagtcaagcaa
ccgcaagtcattgattggcgaatgccttccatcgatggcggtcaattcaaaagcagtcgc
acctatgtcttttttgatgcgaaagttaagcagcagtttgagcggcaattctcctttggt
ggcccgacgctgacggctgagcaagtcacatcgccgttagccaacgccgttttggttgat
ttgccgcagaatcgggcacagttgcgggcggtcatgcagcaaatccaaccaccagtcgcc
attatgttttacggcgcacccagtcatttagtggccattccgacgcgcgttgagttcggc
gctgttttgcattttctcaaggcccatcccggttttgacaagcactacattccggcaatc
gctaaagccgtgcacttgacggtccatcaggtgatcttggcgattcaggtgttttttgaa
cttgactttgttacaatagatggtgcttttatttctccagtcacagcaccggccaagaag
ccactgcagacggccaaggcttatgcagcgcgcgaagaattcctgacgctcgcgcagcag
ctgcaaaccatgccgcgggcccagttggaagcgatgttgctgacggagcatacagacagt
gaggtagaatcatga
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