Lacticaseibacillus styriensis: LACSTY_002560
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Entry
LACSTY_002560 CDS
T10276
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lsb Lacticaseibacillus styriensis
Pathway
lsb03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
lsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LACSTY_002560
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LACSTY_002560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
DnaJ_CXXCXGXG
AAA_21
nSTAND1
AAA_23
AAA_25
nSTAND3
ATPase
Motif
Other DBs
NCBI-ProteinID:
WLV80474
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Position
2717484..2720012
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AA seq
842 aa
AA seq
DB search
MAIPDHISVRGAYVNNLKHLNVDIPLNKLVAITGRSGSGKSSLAMGVLYAEGMRRYMSAL
STYTRRRLGQTSPAAADSVKHIPSAIALRQRPVVPGIRSTVGTATEALNVIRLMFSRLGS
PVCPNGHRVPPTLDIAKAMDLPNDGESGMGMITCPTCGIHFMAFAAEDFAFNSTGACPTC
GGTGQARTLAANRLIPDQTLTIRQGAVASWRLPGRNFMPYVAQAIGIDIDTPFQDLPKDQ
QEQVWHGQRKKYAINIPSKTGRVFHMDHAQYENAFNAVEDSLATTKNERAIQRLNRFYEF
GVCPTCHGSRFAPKLLSQLLVDQNIAQVSDMTLTQLSAFIPKIYQWLPENMQALAHDIIK
ELTQLLKPIMDLGLSYLTLSRAAASLSTGELQRIQLSRTLRTETTGVLYVLDEPSIGLHA
ANVAGLLEVMHGLVDQGNSLVVVDHNTAIINAADQIVEIGPGAGVDGGRILDQGDPATVS
RNPHSLIAPFLTGKTKLIVRPQVGAEAVAKAEQLQLTVTDRFNLHNLHVGFPINCFSAVS
GFSGAGKSTLIFDALVPALSATKDQPGPTFVRDLKNGGIRHVVAIDATPVGKNVRSTVAT
YTDILDHLRHLFAALPDAKAKHYTSSHFSYNVKAGACPTCGGTGVINLDIQYLPDMQQTC
PTCHGRRYNPEVLKIKWHDRSIADLLDLDVDTALKVFKDEPAIAHTLQTLHDMGLGYLHL
GESTPTLSGGEAQRLKLVAHMGRSQKDTLFVFDEPSVGLHPLDVQTLVAVFQRLLKTGAT
VIAIEHDLDVIANADYVLDLGPKGGAEGGQVMAAGTPQAIARQGHGETAKYLAAHLAAFQ
VK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccagatcatatcagtgttcgcggtgcttacgtcaataacttgaaacacctt
aacgtggatatccccttaaacaaactcgtggcgattaccggtcgttcaggctccggtaaa
agttcgctggcgatgggcgttttgtacgcggaaggcatgcggcggtatatgagcgctttg
tcgacttatacgcgccggcggttagggcagacaagtccggcggcggctgattcggtcaag
catattcccagtgcgatcgccctcagacagcggccggttgtgcctggcattcgctcaacc
gttggcaccgccacggaagccttaaatgtgatccgcctgatgttttcccgtctcggctca
ccggtttgtccaaatggtcaccgcgttccgccgacacttgatattgccaaggccatggat
ctgccaaatgatggcgaaagcgggatgggcatgattacctgtccgacttgcgggattcac
ttcatggcctttgcggcagaggattttgccttcaattcgactggcgcatgcccaacctgt
ggcggcacgggtcaagcgcgaacgctggcagccaatcgcctcatccccgaccaaacgctg
acgattcgccaaggcgccgttgcctcatggcggctgcccggacgtaacttcatgccatac
gttgcccaggcaatcggcattgacatcgatacccctttccaggatcttcccaaagaccaa
caggaacaggtttggcatggtcaacggaaaaaatacgccattaatatccccagcaaaaca
ggcagagttttccacatggaccacgcacaatacgaaaatgccttcaatgcggtcgaagat
tctttagccactaccaagaacgaacgcgcgattcagcgtctgaatcggttctatgagttc
ggcgtttgcccgacctgtcatggcagccggtttgcgccgaaattgttgtcacaacttttg
gttgatcaaaatatcgcgcaagtcagcgacatgaccctgacgcagctgtccgcttttatc
ccgaaaatctaccagtggctgccggaaaatatgcaggcgttggctcacgacatcataaaa
gagttgacgcagttgcttaagccgatcatggatttgggcctgagctacctgaccttaagc
cgggccgccgcatcactgtccaccggtgaattgcaacggatccagctcagtcgaacacta
cgcaccgaaacgaccggcgttctatatgtcctcgacgaaccttctatcgggttgcatgcc
gccaatgttgccggtttattggaagtgatgcacggcttggttgatcaaggcaactcactg
gtggtcgtggatcacaacacggcgatcatcaacgcagcggatcaaatcgtcgaaatcggc
ccgggtgccggcgttgacgggggacgcatcctcgatcagggggatcccgccaccgttagt
cgcaatccgcattcgttaattgccccatttttaaccggcaaaaccaagctcatcgtccgc
ccgcaagttggcgccgaagcggttgccaaggccgaacaattgcagttgaccgtgacggat
cgcttcaacctgcacaacttgcatgttggcttcccgattaattgcttctccgccgtatct
ggcttctccggcgctggcaagtcgacgctcattttcgatgcgttagtcccggcattgtcg
gcaacaaaagatcagccgggtccgacttttgtccgcgatctcaaaaacggcggcattcgg
catgtggtcgccattgacgccacaccggttggcaaaaatgtgcgttcaaccgttgccact
tacactgacattctcgatcacctgcgtcatctgttcgcagctttgccagacgccaaagcc
aagcattataccagcagtcacttctcctataacgtcaaggcgggtgcctgccccacttgt
ggcggtaccggtgtgatcaatctggacattcagtatttgccggatatgcagcaaacctgc
cctacctgtcatggtcgccgctacaatcccgaggtcttgaaaatcaagtggcacgaccgc
agcattgccgacctgctggatcttgacgtggatacagcgctcaaggtattcaaggatgaa
ccggcaatcgcccataccttgcagacgctccacgacatggggctgggctacctgcattta
ggcgaaagcacgccgacactatccggtggtgaggcgcaacgactcaagctggtcgcacac
atgggccgttcccaaaaagacacgctattcgtcttcgatgaaccttccgttgggctacac
ccccttgatgttcaaacattggtggcagttttccagcgccttttaaaaaccggcgcaacc
gtcattgccattgaacacgacctagatgttattgccaacgccgattacgttttggactta
ggaccaaaaggcggcgctgaaggcggccaagtcatggcagccggcacaccgcaagccatc
gctcgccaaggccacggcgaaaccgccaaatacttagcggcacatctggcggcttttcag
gttaaatga
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