Leptodesmis sichuanensis: KIK02_00800
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Entry
KIK02_00800 CDS
T07779
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KIK02_00800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsc03021
]
KIK02_00800
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_00800
Enzymes [BR:
lsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KIK02_00800
Transcription machinery [BR:
lsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KIK02_00800
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KIK02_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UIE38236
LinkDB
All DBs
Position
157999..158952
Genome browser
AA seq
317 aa
AA seq
DB search
MVQFQVECLDTKTDDRDRSQISRFVIEPLERGQGTTLGNALRRVLLSNLEGAAITAVRIA
GVSHEFATVPGVREDVLDILLNMKKVVLKSYSSQPQIGRLLVQGPMTVTAEHFELPSDVE
LVDPSQYIATLSPNSTLEMEFRIEKGKGYRAVDKGRDDSTALDFMQIDSVFMPVRKVNYS
VEDARVGDAMEKDRLIMEVWTNGSLTPQEALSQAANILVDLFNPLKEITIEPLDKEDDED
NDPTNQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGAKSAEEVVEALQ
QRLGITLPQEKSSKNNH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtggtacagtttcaagttgagtgtttagatacaaaaactgacgacagagatcgcagtcaa
attagtcggttcgtgattgagccattagagcgggggcagggcacaactttggggaatgcg
ctccggcgggtattgctttccaatctcgaaggagccgccattacagccgttcggatcgcg
ggtgtcagtcatgagtttgccaccgttccaggggtgcgggaggatgtcttggatattctc
ctgaatatgaagaaggtggtgttgaagagctactcttctcaaccccaaattgggcggctt
ctggttcaaggtccgatgacagtaacagcggagcattttgagttgccctcggatgttgag
ttggttgatccttctcaatacattgcgactctttctccgaattcaacgctggaaatggaa
tttcggattgagaaggggaaaggctatcgggctgtagataaagggcgggatgactcgacg
gctctggacttcatgcaaatcgattctgtcttcatgcctgtacggaaggtcaactactcg
gttgaagatgctcgtgtgggcgatgcgatggagaaagatcgcctgattatggaggtctgg
acgaatggcagtctgactccccaggaagcgctgagtcaggcggctaacattctcgtagat
ctgttcaatcctctgaaggagatcacgatcgaaccactcgataaagaggatgacgaagat
aacgatcccacaaatcaaattccgatcgaagagttgcaactttctgtgcgggcatacaac
tgcctgaagcgtgcgcaaatcaattccgtcgcagatctgctggactacagccaggaagat
ttgctggaaatcaagaacttcggggcgaaatcagccgaggaagtggtagaagccttacaa
cagcgtctgggcattactctgcctcaagaaaaatcctctaagaacaatcattag
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