Leptodesmis sichuanensis: KIK02_00945
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Entry
KIK02_00945 CDS
T07779
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
lsc
Leptodesmis sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsc03021
]
KIK02_00945
Transcription machinery [BR:
lsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KIK02_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_24
Sigma70_ECF
HTH_23
HTH_Crp_2
HTH_8
KORA
HTH_3
MarR_2
HTH_AsnC-type
HTH_30
HTH_17
HTH_11
HTH_Tnp_4
GerE
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UIE38261
LinkDB
All DBs
Position
181182..181967
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AA seq
261 aa
AA seq
DB search
MSTTSNYELKSESLQLLREYQQIACPQVRNRLVELNFGLVRREAHHWMNQCNESYEDLLQ
VGSIGLIRAIERFDVSKGHAFSSFAIPYIRGEIQHYLRDKSPSVRIPRRWQALQRKAVWV
MRELHVELNRQPSDLEIAAALEISLEEWQEIKLAGQNRSLLSLDAPIKDEDNGTSSLADL
VPDTRYRSFQLAQEDQIRLQLALTQLEKRTRQILEFVFLYDLTQKETAERLGISAVTVSR
RVKKGLDLLQRLMGGSEGEAE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctactactagcaattacgaactcaaaagcgaaagtttacaactgctaagggagtat
caacagattgcctgtcctcaagttcggaatagattagttgaacttaactttgggctggtt
agaagagaagctcaccactggatgaaccagtgtaatgaaagttatgaggatttacttcaa
gttggtagtattggactgatccgggcgatcgaacgcttcgatgtatccaaaggacatgct
ttcagttccttcgcaatcccctacattagaggcgaaatccagcactatttaagagacaaa
agcccttcagtccgcattccccgacgttggcaagccctgcaacgcaaagccgtttgggtg
atgcgtgagctacacgttgaattaaaccgccagccctcagatttagaaatagccgcagcg
ttagaaatttcattagaagagtggcaagaaattaagttagctggccaaaaccggtctctt
ctgagtttagatgctcctataaaggatgaagacaacggtacttcatcgctggccgatctg
gttcctgatacccgctatcgcagctttcaactggcccaggaagaccagattcgtctgcag
ttggcgttgactcagctagagaaacgcacccgccaaattttagagtttgtctttttatac
gacttaactcaaaaagaaacagcagaacgattgggaatcagtgctgtgacagtatctcgt
cgagtgaaaaagggactggatctgctgcaacggttgatgggtggttcagaaggcgaagca
gaatag
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