Leptodesmis sichuanensis: KIK02_02080
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Entry
KIK02_02080 CDS
T07779
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KIK02_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsc03021
]
KIK02_02080
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_02080
Enzymes [BR:
lsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KIK02_02080
Transcription machinery [BR:
lsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KIK02_02080
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KIK02_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
ANM3_zf-C2H2
ACBP4_C
Motif
Other DBs
NCBI-ProteinID:
UIE38469
LinkDB
All DBs
Position
complement(413069..414943)
Genome browser
AA seq
624 aa
AA seq
DB search
MPKLEQRFDYVKIGLASPERIRQWGERTLPNGQAVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNAYVVLSPGNAENLAYKQLLTEDQWIEIEDQLYSEDSQL
TGVEVGIGAEALQRLLQDINLEEEAEKLREEIANSKGQKRAKLIKRLRVIDNFIATGSKP
EWMVLTVVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKIHQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPIVWDVLEE
VIEGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNILSPATGRPIITPSQDMVLGCYYLTAENPDAQKGAGRYFASLEDA
ITAYEQQQVDLHTYVWVRFDGLVETDEPDDEVLEEQTSPDGVVTKTYKFRRVREDAEGNV
ISQYVKTTPGRIIYNKTVQDALAS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctagagcagcggtttgactatgtgaagattggtctggcatctccagagcgg
atccggcagtggggggaacgcaccctaccgaacggtcaggccgtgggtgaggtgacgaag
ccggaaaccattaactatcggacgctcaagccagaaatggatgggctgttttgtgagcga
atttttggccctgcgaaggattgggagtgccattgcggtaaatacaagcgggtacgccac
cgggggattgtctgcgaacgctgtggtgtggaagtaacagaatcccgcgtgcgtcgtcac
cgcatgggctatatcaagctggccgctcccgtggctcacgtctggtatttgaagggaatt
cccagctatatggcgatcttgctcgatatgccgctgcgggatgtggagcaaatcgtctac
ttcaatgcctatgtggtgctcagtcccggtaatgctgagaatctggcttacaagcagttg
ctgactgaagatcagtggattgagatcgaagatcaactttacagtgaagactctcaactc
accggggtggaagtcgggattggcgcagaagctctccagcgcctgctccaggatatcaat
ctggaagaggaagcagaaaagctgcgggaagagattgccaactccaaggggcaaaaacgg
gccaagttgatcaaacgcctgcgggttatcgataacttcattgccaccggatcgaagcca
gaatggatggtgttaaccgtcgtcccggtgattcctcccgacctgcgaccgatggtgcag
ttggatggaggccggtttgccacgtctgacttgaatgacctgtaccgccgggtgattaac
cggaacaaccgtctggctcgcttgcaggaaattctggctcccgaaatcatcgtccggaat
gagaagcggatgctgcaggaagccgtggatgccctgattgataatggtcgtcgcggtcgg
acggtggtaggagcgaataaccgtcccctgaaatcgttgtcagacattattgaagggaaa
cagggccgcttccggcaaaacctcttgggtaagcgggtggactactcaggccgttccgtt
attgtggtggggccaaaactgaagattcaccagtgcggtcttcccagagaaatggcgatc
gaactcttccagccttttgttatccatcgcctgatccgtcaaggattggtgaacaacatc
aaggcggccaagaagctgatccagcgcaatgacccgatcgtctgggatgttctggaagag
gtgattgaaggccaccccgtattgctgaaccgggcacccacgctccaccgtttgggaatc
caggcctttgaaccaattctggtcgaaggtcgggcgatccaactgcatcccctggtctgt
cccgcctttaacgcggacttcgacggtgaccagatggcggtgcatgtgcctctgtctctg
gaagcgcaggcagaagcccggttgttgatgctggcctcaaataacatcctgtctccagcg
acgggacgacccatcattacacccagccaggacatggtgttgggctgttactacctgacg
gcagaaaatcccgatgctcaaaaaggtgcaggtcgctactttgccagcttagaggatgcg
atcaccgcctacgagcaacaacaggttgatctgcatacctatgtctgggtgcggtttgat
ggtctggtagaaacggatgaaccggatgacgaggttctggaagaacagacctcaccggac
ggagtggtcactaagacctataaattccgtcgggtgcgggaggatgccgagggcaatgtc
atttctcaatatgtgaagacgacaccgggacgaatcatttacaacaagacggtgcaggac
gcgctggcgagctaa
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