Leptodesmis sichuanensis: KIK02_04190
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Entry
KIK02_04190 CDS
T07779
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03420
Nucleotide excision repair
lsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KIK02_04190
03430 Mismatch repair
KIK02_04190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_04190
Enzymes [BR:
lsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIK02_04190
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KIK02_04190
MMR (mismatch excision repair)
Other MMR factors
KIK02_04190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
DEAD
AAA_25
DUF5956
Motif
Other DBs
NCBI-ProteinID:
UIE38827
LinkDB
All DBs
Position
870032..872296
Genome browser
AA seq
754 aa
AA seq
DB search
MQTTSPPLSIDDLRASLRPGQRELADWIGGPLAVAAVPGAGKSTGMAVAAAIAIARQQLN
ARRQLIVVTFTRSAAANIKAKIRGYLKDLGLPQQGFQVYTLHGLAWAIARTHLELTELNS
DSVLVTVTQNHRLIRTCVEQWIAANPRLYQRLLEGRQFDGEETERLRRQSVLRTEVLPEL
ATTVIREAKSSGLMPDDLQRLGQEMGDDYLVLAVAAGLYQTYQEQLRRRNWMDYDEMILA
ALRVLQDPTVRQYWQTQVFAVFEDEAQDSSPLQTRLLEILAADPTEPDNPARANLVRVGD
SNQAINSTFTPADPIFFREFCSQCDRQQRLATMTQAGRSAPPIIQAANFMLQWVNESRLA
KSEIPFEMQQIQPVGANDPQPNPAPESHGLTLVTPTDTYQTVELIGQRVLQLFKKHPHHS
AAVLVRTNEQGRFVARELRRWYGEALSIYEVGQQERQSHVPAEMLTLLQFCDRPHSPDYL
KAALTTLMERKLIPTQDLNALVPFPEQFLYPGPLDPPQTEPVLQARYFCTSLLRARLELP
AYQLISFCAYTLGYDQSELATADKLCDRIAQQTGHDNTLPALLGVLQEIVNSERFEAIDT
ENNDDRYTQPGRLTIITMHKAKGLDWDYVFLPFLHENVIPGTQRIPLPAQFLGDFTLAEV
ARAQIRAHLHQQPTFADALTAWERAQNLKTAEEFRLLYVAMTRAKRLLWMSAAAKAPFTW
NKPENVDDRKPCPVFPALQERFPASVLSCRGSFA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactacctcccctcccctctccattgatgatctccgggcttccctgcggcccgga
cagcgagaactggccgattggataggtgggccgttagcagtagcagccgtgccaggagcg
ggaaagtccactgggatggccgtggcggcggcgatcgcgatcgcccgtcaacaactgaat
gcccgtcggcagttgattgttgtgacctttacgcgatcggcggcggccaatattaaagcc
aaaattcgcggctatttaaaggatttgggcttaccgcagcagggttttcaggtgtatacg
ttgcatgggctggcctgggcgatcgctcgcacccatctggaactcaccgaactgaattcc
gatagcgttctggtgacggtgacgcaaaaccatcgcctgattcgcacctgtgtggaacag
tggattgcggccaatccccgactgtatcagcgattgctggaagggcggcagtttgatgga
gaagaaaccgagcgcttacgccgacaatccgtgttgcgcacggaggtgctgccggaactg
gcaaccacagtgattcgagaggccaaaagctccggattaatgccggacgatttacagcgt
ttggggcaggaaatgggcgatgactatctggtgctggcagtcgccgctggtttgtatcag
acctatcaagaacaactgcggcggcgtaattggatggattacgacgagatgattctggcg
gcactccgggtattgcaggatccgacggtgaggcagtactggcaaacgcaagtattcgcc
gttttcgaggatgaagctcaggattccagtcccttacaaactcggctgttggaaattctg
gcagcggatcccacggagccagacaacccagcacgagccaatctggtacgggtgggggac
tctaatcaggcgattaattcgacctttacgccagccgatcccattttctttcgcgaattt
tgcagtcagtgcgatcgccagcaacgattagccaccatgacccaggcaggccgcagtgcc
ccccccattattcaggccgcaaacttcatgttgcagtgggtaaatgaatccaggctggca
aagagtgaaatcccgtttgagatgcaacagattcaacccgtcggtgcgaacgatccgcaa
ccgaatcccgccccagagagtcacggtttaacattggtcacgccaacggatacctatcaa
accgttgaactgattggccagcgagtactccaactattcaagaaacacccgcaccattct
gcagcagtgctggtacgcaccaatgaacaggggcggtttgtggccagggaattgcgacgc
tggtacggggaagcgctctccatctatgaagtggggcagcaggaacgccaatcccatgta
ccggcagaaatgctaactctgttgcagttctgcgatcgcccccactctcccgattacctg
aaagccgctttgacgaccttaatggaacgtaaactgattccaactcaggatctgaatgcg
ttagtgccctttcccgaacaattcctttaccctggccccctggatccgcctcaaacagaa
cccgttttgcaggctcgctatttttgtaccagtctgttgcgtgcccggttggaactgcct
gcctatcaactgatttccttctgtgcctataccctgggctacgaccagagtgaattagcc
acagcagataaactgtgcgatcgcatagcccaacaaactggccatgacaatacgctgcct
gcgctgctgggagtgttgcaggaaatcgtcaactcggagcgctttgaggcgatcgacacg
gaaaacaacgacgatcgctacacccagcccggacgactcaccatcattaccatgcacaaa
gccaagggactggactgggattacgtcttcctgccctttctgcacgaaaacgtgattccc
ggcacccagcgcattccccttcctgctcaatttctgggagactttaccctggcagaggtg
gcccgtgcccagattcgtgcccacctgcaccaacaacctacctttgccgatgccttaacg
gcctgggagcgtgcccaaaacttgaaaactgccgaagaatttcgcctgctctatgtcgcc
atgacccgcgctaagcgtctgttgtggatgtccgccgcggccaaagctcccttcacctgg
aacaaaccggagaacgtggacgatcgcaaaccctgccctgtcttccctgcactgcaagag
cgtttcccagcctccgtcctatcttgtcgtggaagttttgcctga
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