Leptodesmis sichuanensis: KIK02_05135
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Entry
KIK02_05135 CDS
T07779
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03410
Base excision repair
lsc03430
Mismatch repair
lsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KIK02_05135 (recJ)
03430 Mismatch repair
KIK02_05135 (recJ)
03440 Homologous recombination
KIK02_05135 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_05135 (recJ)
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KIK02_05135 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KIK02_05135 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KIK02_05135 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UIE38986
LinkDB
All DBs
Position
complement(1070169..1072244)
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AA seq
691 aa
AA seq
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MTDLSVPPSSSTIANKLPPQRWQIAAAQPELAQSIAAALELSPLMAQVLLNRDLTDLEQI
QAFLNPESLPLPSPLAEFSDLPLSLELLINTINNRQRIAICGDYDADGMTSTALLMRALR
ALGARVDYAIPSRMAEGYGINQRIVDEFYEEGVGLILTVDNGIAAHAPIAHARELGIAVI
ITDHHDLPPTLPDANAILNPKRLAETSPYRGLAGVGVAYILAKSLAQSMGSSLELGDSLL
ELFTLGTIADLAPLTGVNRRWVKQGLQLLAKSKLTGVQALIQVSGLSGEKDLKPEAIGFR
LGPRINAVGRLADPQIVIELLTTDDMGTALERAMQCEQINQQRQRLCEEIEQEAVAICES
GEFNIQRDRVLVVVQPGWHHGVIGIVASRLVERYGVPVFIGTYEDEGQQHIRGSARSIPE
FHVFEALEFCQDLLEKHGGHRAAGGFSLKAANLDALRSRLSEFACQCLQPEHLKPLVKID
AEASLSQIDFALYHQMEALQPCGVENPEATFWSSQIRIHEQKRIGKGHLKLTVSQHQGDA
TEQPPRRFCAIAWRWGDYYPLPPVLDLAYRLRTNEWNGEVSLQLELVGSRPVAVTTFPTP
DPPTTFVHEERSYACKLVEAATGKELRIRNAQGKVLTIQQGQRWGWLTKGPGDRVQVDVS
QPYYFNLIKAALIALEGEGKQGSGVGNQRWE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttatctgttcctccaagctccagcacgatcgcgaacaaactgcccccccaa
cgctggcaaattgctgcggctcaaccggaattggctcagtccattgctgcagctctggag
ttgtcgcctttgatggcccaggttctgttgaatcgtgacctgacagacttagaacagatt
caggcatttcttaatccagaaagtctgccccttccctctcccctggctgaattctctgat
ttgccactcagcctggaactgttaattaataccattaacaaccgccagcggattgccatc
tgtggtgactatgatgccgatgggatgaccagtacggctctgctgatgcgggcattacgc
gccctgggagcacgggtagactatgcaattcccagccggatggcggaaggatacggcatt
aaccagcggatcgtggatgagttctacgaagaaggagtagggctgatcctcacggtggat
aatggcattgctgctcatgcgccgatcgcccatgcgcgagaattgggcattgccgtgatc
attaccgaccatcacgacttgccgcctaccctgcccgatgccaacgcaattctgaatccc
aaacggttggccgaaacttcaccctatcgcggactggccggagtgggagtggcctacatt
ctggcgaaatccctggcccaaagtatgggcagttccctggagttgggtgattccctatta
gaattgtttaccctggggacgatcgccgacctggctcccctgacgggcgtgaatcggcgc
tgggtaaaacagggattgcaactgttagcaaaatcgaaattgaccggagttcaggctcta
attcaagtctctgggctgagtggcgagaaggatttgaaaccagaagcgatcggctttcgg
cttggcccccggattaacgccgttggtcgtctcgccgatccgcaaattgtgattgagctg
ttgaccaccgatgacatgggaacggccctggaacgggctatgcagtgtgagcaaattaac
caacaacggcagcggctgtgtgaagagattgaacaggaagccgtggccatttgcgaaagt
ggggagtttaatattcagcgcgatcgggttctggtggtggtgcaaccgggctggcatcat
ggtgtcatcgggattgttgcttcccgcctggtggaacgctatggcgtgcccgttttcatc
ggcacctacgaggatgaggggcaacagcatattcgcggttcagcccgcagtattcccgaa
tttcacgtctttgaagctctggaattttgtcaagacctgctggaaaagcatggtggacac
cgggctgccggaggcttttctttaaaagctgcgaatctggatgccctgcgatcgcgcctc
agtgaattcgcctgtcagtgcctgcaaccagaacacctcaaaccgctggtgaaaatcgat
gcggaagcctccttaagtcagattgactttgccctgtatcaccagatggaagccctgcaa
ccctgtggcgtagagaacccggaggccaccttctggtcaagccagatccgtatccatgaa
cagaagcggatcggtaaaggacacctgaaattaaccgtgagtcagcatcagggagacgca
accgaacaacccccccgtcgcttttgtgcgatcgcgtggcgctggggagactattacccc
ctgcctcctgttctggatctggcgtatcggctgcgtaccaatgaatggaatggcgaggtt
tccctgcaactggaactggtgggcagccgtcctgttgctgttactactttcccgactcct
gacccgcccacgacctttgtgcatgaagaacgaagttatgcctgtaagctggtagaagca
gcaaccggaaaagaactgcgaattcgcaatgctcaaggcaaggtattgacaatccaacag
gggcagcgctggggatggttaacgaaaggtcctggcgatcgcgtccaggtggatgtatct
cagccttattatttcaacctgattaaagcggcattgatagctttggagggagaggggaaa
cagggatcgggggtcgggaatcagagatgggaatag
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