Leptodesmis sichuanensis: KIK02_08020
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Entry
KIK02_08020 CDS
T07779
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lsc
Leptodesmis sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsc03009
]
KIK02_08020
Enzymes [BR:
lsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
KIK02_08020
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
KIK02_08020
Ribosome biogenesis [BR:
lsc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KIK02_08020
23S rRNA modification factors
KIK02_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
PDDEXK_9
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UIE39493
LinkDB
All DBs
Position
complement(1697914..1698744)
Genome browser
AA seq
276 aa
AA seq
DB search
MPKQRLDLLLVELNLCDSRQQAQRLIRAGEVKVNQQVVDKPGTEVDPAAQIQVRQKSPYV
SRGGEKLAKAIAQFQIPIAGRICLDGGISTGGFTDCLLQAGAAQVYGIDVGYGQVAWSLR
QDPRVILHERKNLRYLKPEDIYPPDATWADLGVADVSFISLTKVLPALWELLRSPREVIL
LVKPQFEVGRDRVGKNGVVRDPQDQAMAIEQVLKAAQNLGWIYQGVTWSPLLGPAGNIEY
LLWLKSLPSDDAATASTPTLNDLKQLVQAAHQALAA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcaacgtctggatttgttactggtagagctaaacctgtgtgactcacgacag
caggctcaacggctgatccgggcgggtgaggtgaaagtgaatcagcaggtggtggataaa
ccaggaacagaggtcgatccagccgcacagattcaagttcggcagaagtctccttatgtc
tccagagggggagagaaattggccaaggcgatcgcccaattccagatcccgattgctgga
cgcatctgcctggatggagggatttccacgggaggctttaccgattgtctgttacaggct
ggagctgctcaggtgtatgggatcgatgtggggtatggacaggtggcctggagtttacgc
caggatccccgtgtcattctgcatgagcgcaagaatctgcgttacctcaaaccggaggac
atttatccaccggacgcaacctgggccgatctgggggtagccgatgtatcctttatttcg
ctgactaaagttttgcctgcattgtgggagttgctgcgatcgccccgtgaggtcatcctt
ctggttaagcctcagtttgaagtggggcgtgatcgggtgggcaaaaatggagtcgtccgg
gatcctcaagatcaggcaatggcgatcgagcaagtgctgaaagccgctcaaaatctggga
tggatttatcagggggtaacatggtcgccgttactggggccagcaggcaatattgaatat
ttgctatggctgaaaagtttaccgtccgatgatgctgctaccgcttcaactcccaccttg
aatgacttaaaacagcttgttcaagcggctcaccaagccttagctgcctag
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