Leptodesmis sichuanensis: KIK02_08845
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Entry
KIK02_08845 CDS
T07779
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIK02_08845 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsc03019
]
KIK02_08845 (recQ)
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_08845 (recQ)
Enzymes [BR:
lsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIK02_08845 (recQ)
Messenger RNA biogenesis [BR:
lsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KIK02_08845 (recQ)
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KIK02_08845 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UIE40442
LinkDB
All DBs
Position
1890692..1892917
Genome browser
AA seq
741 aa
AA seq
DB search
MIATSPSNHRFASLEQALKHYFGYESFRPGQRLVIEKALQNQDLMVVMPTGGGKSLCYQL
PALLKPGLTIVVSPLIALMQDQVQALQDNGIPATFLNSSLSGTELRERERAVVEGEIKLL
YIAPERLLNEELVTSWISQVYVSAIAIDEAHCVSEWGHDFRPEYRQLSQLRQWCPNVPIM
ALTATATERVREDIIHQLALQDPVVHVATFNRPNLYYEVRPKQRQSYSELVQIIRQSQGS
GIVYCLSRKRVDELAAKLQHDGISALPYHAGMDNKTRAENQTRFIRDDVQVMVATIAFGM
GINKPDVRFVVHYDLPRNIEGYYQESGRAGRDGEPARCTLFFGTGDIKTVEFLISQKVDP
ATGEPLENEQRIATQQLRRVVNYAEATECRRIIQLGYFGESFQGQCGNCDNCLQPKPIED
WTIEAQKFLSCVARVRERFGLNYIIDVLRGSKSQRILQNSHDKLSTYGIGKDRSTEEWRM
LGRSLIHQGLLDETTDGYSILKLNEASWEVLRKQRAVAIAIRPDRIKEVVSPLETIDTAE
TEELLQRLHLLRKRLADEQGVPPYIVFANATLRLMAQQQPLNRAQFATLSGVGSRKLSQY
GDLFLKEIHNFRQEKGLPLKSSPSENVTSISPAANSSLTLYPSDTQRLTLQLYQQGLKPF
EIAEQRNLRLSTIATHLAELIEMGYDIPLDDLVPEERQDKIREAIAAVGSDSRRRIRDHL
GESYGYDEIHYVQAWWKREHT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgattgccacctctccctccaatcatcggtttgcctcgctggaacaggcgctgaagcac
tactttggctacgaaagcttccgtccaggacagcgattggtgattgaaaaagcgctccag
aatcaagatctgatggtagtgatgccgacaggaggcggtaaatctctgtgttatcagttg
cccgctttactgaagccgggattgacgatcgtcgtttctcccctgattgccttaatgcag
gatcaggtacaggcattgcaggacaacggcattcccgccacttttttgaatagcagcctc
agtggtacggagttgcgggaacgagaacgggccgtagtcgagggcgaaatcaaactgttg
tatattgcgccagagcggttgctgaatgaggaattggtcacgtcctggatttcgcaagtt
tatgtgtctgcgatcgccattgacgaagcccactgcgtctctgaatggggccatgatttt
cggccagagtatcgccaactgagtcagttgcgccaatggtgcccgaatgtccccattatg
gcgcttacggctacagcaacggagcgtgtgcgggaagacattattcaccaactggcattg
caggatccggtggtgcatgttgcaaccttcaaccgtcccaatttgtattacgaagtgcgt
ccgaaacagcggcaatcctacagcgaactggtacagattatccgccaatcgcagggatcg
ggaattgtctactgcctgagtcgcaagcgagtcgatgaactggccgctaagttgcagcat
gacggcatttcggcactgccctatcacgcggggatggacaacaaaacccgcgccgaaaac
cagacgcgcttcattcgcgatgatgtgcaggtaatggtggcaacgatcgcctttggcatg
gggatcaacaaaccggatgtgcgatttgtggtgcattacgatctgccgcgcaacattgaa
ggctattaccaggaatcgggccgggccggacgggatggagagcctgctcgctgcacgctg
ttctttggtacaggagacattaaaacagttgagtttttaatcagccaaaaagtggatcca
gcaacaggagaacccttagagaatgaacagcggattgcgactcaacagttgcgacgagtg
gtgaactatgcagaagccacagagtgccgtcgcattatccaattaggttacttcggtgaa
tcgtttcaaggtcagtgtggcaactgtgataattgtctgcaacccaagcccatcgaagat
tggacaattgaagcgcaaaagtttctctcctgtgtggcacgagtgcgggaacgatttggt
ttgaattacattattgatgtcctgcgtgggtcgaaaagtcagcgaattttgcaaaatagt
catgacaagctttcgacttatgggattggtaaagatcgcagtactgaagaatggcggatg
ttgggtcgatcgctgatccaccagggcttattagacgaaacaaccgatggctattctatt
ttgaagttaaatgaagccagttgggaagttctgcggaaacaacgagccgtggcgatcgca
attcgacccgatcgcatcaaggaggttgtttctcccctagagacgattgatacagcagaa
acagaagaattgctccagcggttgcatttgttgcggaaacggttggcagacgagcaaggt
gttcctccctacatcgtgtttgctaatgccacgttgcgattgatggcgcaacaacaaccg
ttgaaccgcgctcaatttgccaccctttctggagtgggcagtcgcaaactctcccagtat
ggcgacctgtttctcaaagagattcataattttcggcaggaaaaagggttgcccctgaaa
agttcaccttcagaaaatgttacctctatttcccccgccgctaattcatcgctgactctg
tacccttctgatacgcaacgactgactctgcaactgtatcagcagggattgaaacccttt
gaaattgccgaacaacgcaacttgcgcctgagtacgatcgccactcatctcgcagaactg
attgagatgggctatgacattcccctggatgatctggtgccggaggagcggcaggacaag
attcgggaggcgatcgccgccgttgggtcagattcccgtcgccgcattcgcgatcatcta
ggcgaatcctatggctatgacgaaatccattacgtacaagcctggtggaaacgcgaacat
acttaa
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