Leptodesmis sichuanensis: KIK02_11575
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Entry
KIK02_11575 CDS
T07779
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03030
DNA replication
lsc03430
Mismatch repair
lsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIK02_11575
03430 Mismatch repair
KIK02_11575
03440 Homologous recombination
KIK02_11575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsc03032
]
KIK02_11575
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_11575
Enzymes [BR:
lsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIK02_11575
DNA replication proteins [BR:
lsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIK02_11575
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIK02_11575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Nitr_red_bet_C
Motif
Other DBs
NCBI-ProteinID:
UIE40116
LinkDB
All DBs
Position
2489296..2492856
Genome browser
AA seq
1186 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPELIDRAVELGMPAIALTDHGVMYGAIELLKVCKNKGGA
IKPIIGNEMYVINGDITKQERRPRYHQVVLAKNTLGYKNLVKLTTISNLKGIQGKGIFSR
PCINKELLEQYHEGLIVTSACLGGEVPQAILQGRPEVARRVAQWYKDLFGEDYYLELQDH
GSPEDRIVNVELVNIARELDIQIICTNDSHYISCYDVEAHDALLCIQTGKLITEDKRLRY
SGTEYLKSADEMRLLFRDHLPDEVIEEAIANTLSVAEKIQSYDILGEPRIPDYPIPEGMT
ADQYMAEVAWEGLLKRHKCSSRDEIKPEYRDRLEYELQMMQQMGFATYFLVVWDYIKFAR
DRGIPVGPGRGSAAGSLVAYAMGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIDRRD
EVIQYVTEKYGTERVAQIITYNRMTSRAVLKDVARVLNVPYGESDRMTKMIPVVRGKPTK
LKVMISDDTPAPEFKEKYDKNLTVPGTEPAVTYRRWIDMAMRIEGTNKSVGIHAAGVVIS
AQPLDEIVPLQRNEDGAVFTQYFMEDIESLGLLKMDFLGLKNLTMIQKALELIQQNRGLE
LDLDRLSLDDPATYKLLARGELEGVFQLESSGMRQIVRDLKPSGLEDISSVLALYRPGPL
DAGLIPKFINRKHGREKIDYAHEILKPILNETYGIMVYQEQIMKIAQDMAGYSLGQADLL
RRAMGKKKKSEMEKHQEIFVSGAKERGVEKKVATDLFDQMIKFAEYCFNKSHSCAYGYVT
YQTAYLKANYPVEYMAALLTANSGDQDKVQKYIATCISMGIQVQPPDINRSGVDFTPTGN
SILFGLSAVRNVGMGAIEAILLVREEDGPFKSLADLCARVACSENDRVDARALNRRALEA
LIYCGAFDQLEPNRNQSLHDLELVLDWAQSRARDRASGQGNLFDLLAGTPSLQESAASFD
SAPKAPAVPDLPQQQRLQMEKEILGFYISDHPLRSIREAARILAPINLSDLGDYSEGASV
SAIALISSVKPVVTKKGDRMAILQLEDLTGQTEAVVFPKSYERVQQHIQPDLRVMIWGKV
DRRDDQTQFIVEDIEPVEAVYMVMVELDPRVASDIEQQHRLRNVLLQNKGEDDRAKVPVV
AIVKNQEKRHFVRFGSQFRVQNYQATVNALTKAGFQARASSLVNGA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtgggtctgcacattcacagtgactatagtttgctggatggggccagtcag
cttccagaactgatcgatcgcgccgtggaattggggatgcctgcgatcgccctgacggat
catggggtgatgtatggagcgatcgaattgctgaaggtatgcaagaacaaaggcggggcg
atcaaaccgatcatcggtaacgagatgtatgtgattaatggcgatattaccaaacaggag
cgccgtcctcgttaccatcaggttgtgctggccaagaatacgctgggctacaagaatctg
gtgaagctgaccacgatctcgaacctgaaggggatccagggcaagggcatcttttcccgt
ccctgcatcaataaggaactgctggagcaatatcacgaaggcttgattgtcacttccgcc
tgtctgggtggagaagtgccgcaggcaattttgcagggcagaccagaagtggcccgtcgc
gtggcgcagtggtacaaggatctgtttggcgaggactattacctggaacttcaggatcac
gggtcgccggaagaccggattgtgaatgtggaactggtgaacattgcgcgagaactggac
atccagattatttgcaccaatgactcccactacatttcctgctatgacgtagaagcccat
gacgcgctgctgtgtattcaaaccgggaagctgattacggaagataagcggctgcgatac
agtggcacggaatatctgaaatccgctgatgaaatgcggttgctgttccgtgatcattta
ccggatgaagtgattgaggaggcgatcgccaataccctctctgttgcggaaaaaatccag
agctatgacattctgggcgaaccccggattcccgactatccgattcccgaaggcatgact
gccgatcagtacatggcggaagtcgcctgggaaggattgctgaagcggcacaagtgttcc
tcccgtgacgaaatcaaaccggagtaccgcgatcggttggaatacgaactccagatgatg
cagcagatgggatttgccacctactttctcgtcgtgtgggattacatcaagttcgcccgc
gatcgcggcattcccgtagggccaggacggggatccgccgctggatcgctggtggcctac
gccatgggcatcaccaatattgatccagtgcatcacgggttgctatttgaacgcttcctg
aatcccgaacggaaatcgatgccggatattgacacggatttttgtatcgatcgccgggat
gaagtgatccaatacgtcaccgagaaatacggcaccgagcgggtagcacagatcatcacc
tataaccggatgacctcccgggcggtactgaaagatgtggcgagagtgctgaatgtgccc
tacggggaatccgatcgcatgacaaaaatgattcccgtggtgcgcggcaaacccaccaaa
ctgaaggtgatgatttccgatgacacgcctgctccggaatttaaggagaagtacgacaaa
aatctcaccgttccggggacagaacccgctgtcacctatcgccgctggatcgatatggcg
atgcggattgagggcactaacaagagtgtgggcattcacgcggcaggcgtggtgatttct
gcacaaccactggatgaaattgtccccttgcagcgcaacgaggatggagccgtttttacc
cagtacttcatggaagatattgagtctctggggttgctgaagatggacttcctggggcta
aaaaacctgacgatgattcagaaagcgctggaactgatccagcaaaatcgcggactggaa
ctggatctcgatcgcctatccctggatgatcccgcaacctacaagctactagctcgtggt
gaactcgaaggtgtgttccagttagagtcttccgggatgcgacagattgtccgcgacctg
aagccgtccggtctggaagatatttcctccgtcctggcgctctaccgaccggggccgctg
gatgcgggactgattcccaaattcatcaaccgcaaacacgggcgggaaaaaattgattat
gcccatgagattctcaagccaattctgaatgaaacctacggcatcatggtctatcaagaa
cagatcatgaaaatcgctcaagacatggctggctactccctgggacaagccgatctgttg
cggcgggcaatggggaagaaaaagaaatcggaaatggaaaagcaccaggaaatttttgtc
tccggtgctaaggaacggggcgtggaaaagaaagtcgccactgatttgtttgatcagatg
atcaagtttgccgagtactgcttcaacaaatctcactcctgcgcctacggctatgtcacc
tatcaaaccgcctacctgaaagccaattaccccgttgagtacatggctgctttgctaaca
gccaacagcggtgatcaggacaaggtgcagaaatatatcgccacctgcatctctatgggg
attcaggtgcaaccgccggacattaatcgctctggtgtggacttcacccccacaggtaac
agcattttgtttggtctatcggcagtgcggaatgttggtatgggcgcgatcgaagccatt
ctgctggtacgagaggaagacggccctttcaaatccctggccgatctctgtgcgcgggtg
gcctgttccgagaacgatcgcgtagatgcccgtgccctcaaccgtcgcgccctggaagcc
ctgatctactgcggtgcctttgaccaactggaacccaaccgtaatcagtctctccacgat
ctggaactggtactggactgggcccaatcccgcgcccgcgatcgcgccagtggtcaggga
aatttattcgatttactggctggtactccctctctgcaggaatctgccgccagtttcgat
tcagccccgaaagctcctgctgtaccggatctaccccaacagcagcgactacaaatggaa
aaggaaattctcggcttttacatctcggatcatcccctgcgttccatccgcgaagccgcc
cgaattctggctcccattaacctcagtgatctgggagactattcagaaggagcctccgtc
agcgcgatcgccctgatctcctctgtgaaacctgtcgtcactaagaagggcgatcgcatg
gcgattctgcaactcgaagatctcaccggacagacagaagcggtggtctttcccaaatcc
tacgaacgagtgcagcaacacattcaacccgatctgcgggtgatgatctggggcaaggtc
gatcgtcgggatgaccagacccaatttatcgtggaggacatcgaacccgtggaagccgtc
tacatggtgatggtggaactggatcccagagtcgccagcgacatcgaacaacaacaccgc
ctccgcaatgtgctgctgcaaaataagggcgaagacgatcgcgccaaagtacctgtggtg
gcgatcgtcaagaatcaggaaaaacgccactttgtccgcttcggctcccaattccgtgtc
caaaactatcaggccacggtcaacgcccttaccaaagctggattccaggccagagcttcg
tcgctggtgaatggagcgtag
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