Leptodesmis sichuanensis: KIK02_15570
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Entry
KIK02_15570 CDS
T07779
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lsc
Leptodesmis sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsc03016
]
KIK02_15570
Enzymes [BR:
lsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KIK02_15570
Transfer RNA biogenesis [BR:
lsc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KIK02_15570
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
MaoC_dehydratas
Motif
Other DBs
NCBI-ProteinID:
UIE36468
LinkDB
All DBs
Position
complement(3325896..3327917)
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AA seq
673 aa
AA seq
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MEKGTLVEFRTNSENPAAEWLRHRRLAVLERPEGKKHWIAIDDRGQSHTLHPREITYEVE
GSYKPAEIKGFIQQVEPYLDPSSLEVAWELLVEDGETVNPSEMALLLFSDQSPPLSYAAH
WLLSEDKLYFKLKGNRYEPRSKTQVAELKHQMTMEAQRQREWQGFIDRLQQRLAGESVEW
QAGDRPRLEALERFAVLGEEATHRAPALETLLHLKRPETPQAAFQLLVDLGLWDPHENLF
LRRSQIPIQFPPKVLEVVQNRLASPPADLHPDRLDLTHLKVYTIDDESTCEIDDGLSLEY
LPDGKQRLWVHIADPTRWVLPGDELDLEARRRSTTVYLPTGMVPMFPSELATGPMSLRQG
QICCALSFGIILDETGAIADYSIHTSHIKATYRLTYEDVDEMLELGGVQGESELEAIAEW
AKLRQQWRQSQGAISINMPESSIKVKDGEITIDVLHNSLARQVVAEMMILAGEAAARYGQ
THNIPIPFRNQPQPELPSEEELLLLPAGPVRSCAIRRCMPRSEMSITPARHASLGLETYT
QVTSPIRRYSDLLAHFQIKAHLRGAPLPFSAEEMQELTLSVSTTVQEAVLVERQTNRYWG
LEFLRRSPNEIWHALMLRWLREQDNLGLVLLEDLGLELAMRFTRSVYPGDHLQLRVSHAD
PRQDIIHFEEVTA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggaacccttgtcgaatttagaaccaacagcgagaatcctgcggcagagtgg
cttcgtcaccgtcgccttgctgttttagagcgtccagagggcaaaaagcactggattgcc
atagacgatcgcggccaatctcataccctgcatcctcgcgaaattacttatgaggtggag
ggttcctacaagcctgccgagattaaggggtttatccagcaggtggagccttatctggat
ccatccagcctggaagtcgcctgggaattgctggtggaagacggggaaactgtcaatcca
tcggaaatggcgctgttgctgttctccgatcaaagtccacccctcagttacgccgctcat
tggctcctctctgaagacaagctgtacttcaagctgaagggaaaccggtacgaacctcgc
tctaaaactcaggtggccgaactgaagcaccagatgacgatggaggctcagcggcaacgg
gagtggcagggctttatcgatcgtctgcagcagcgattagcaggagaatcggtagagtgg
caggcgggcgatcggcctcgcttagaagccttagaacggtttgccgtattgggtgaggag
gcaacccaccgggcacccgccctggaaaccctgttacacttgaaacgacctgaaacgccg
caagctgcttttcaacttctggttgatctgggcctctgggatccccatgagaatttattt
ttgcgtcgcagtcaaattccgattcaatttccaccaaaggtattggaagtggtgcaaaac
cgcttagcttctccccctgctgatctgcatcccgatcgcctggacctgactcacctcaag
gtctatacgatcgatgatgaaagtacgtgcgaaattgatgatggtctcagcctggaatat
ttaccagacggcaaacaacggttgtgggttcatattgcggatcccactcgctgggtattg
ccaggagatgaactggatttagaagcccgtcgccgcagtacaacggtttacctgccgacg
ggtatggttcccatgttcccctcagaactggcaactggccccatgagtctgagacaggga
cagatctgttgcgctctcagctttggcatcattctggatgaaacgggagcgatcgccgac
tattcgattcataccagccacattaaagccacctaccgcctcacctacgaggatgtggat
gagatgctggaattgggaggcgtgcagggagaatcggaactggaagcgatcgcggaatgg
gctaaactgcggcaacagtggcggcagtcccagggtgcgatcagcatcaatatgccggaa
tcctcgattaaggtgaaagacggcgagattaccattgatgtgctgcacaattccctggct
cgccaagtagttgcagaaatgatgattctggcgggagaagccgcagcccggtatggccaa
acccataacatccccattccattccgcaatcagccccagcccgaattgccgtcggaagaa
gaattgttgttgcttccggcaggcccggtacgatcgtgtgcgattcgtcgttgtatgccc
cgcagcgagatgagcattaccccagcccgtcacgccagtttggggctggaaacctatact
caggtgacttctccgattcgtcgttacagtgacctgttggctcacttccagatcaaagcc
catttgcggggtgcacctttgcccttctcagcagaggaaatgcaggagttaaccttaagc
gtcagcactaccgttcaggaagcagtgctagtagagcggcaaaccaaccgttattgggga
ctggagtttctgcggcgatcgcccaacgagatctggcacgctttaatgttgcgctggctg
cgagaacaggacaacctgggcctggtattgctggaagatttggggctggaattggccatg
cggtttactcgctcggtctaccctggcgaccacctgcaactgcgagtgagccacgccgat
ccccgacaagacattattcactttgaagaagttacggcttga
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