Leptodesmis sichuanensis: KIK02_18025
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Entry
KIK02_18025 CDS
T07779
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KIK02_18025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_18025
Enzymes [BR:
lsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KIK02_18025
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KIK02_18025
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KIK02_18025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
TniQ
Motif
Other DBs
NCBI-ProteinID:
UIE36891
LinkDB
All DBs
Position
complement(3833578..3834564)
Genome browser
AA seq
328 aa
AA seq
DB search
MPELPEVETVRRGLNQVTLNQTIQGGEVLLDRTLAYPTSAVNFLAGLQGAAIVQWHRRGK
YLLAELDREGREDGEGAGEVRGVRHEAREKIASQATNHEPRTNRLPGQNPKSKIQNPSPA
GFLGVHLRMTGQLLWVDPAEPLPKHTRVRLLFTSGYELRFVDQRTFGQMWWVPPGMAPEE
IMTGLQPLGPEPFSEEFSVSYLYEQLHHRHRPIKSALLDQAIVAGIGNIYADEALFLSGI
RPEKLCTRLSRNQVRQLHANIVQVLLDSIEAKGTTFSTFRNVEGVNGNYGGRAWVYARDG
QPCRTCGTVIARLKLAGRSAHFCPKCQK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactccccgaagttgaaactgtccgtcgaggcttgaatcaagttaccttgaac
caaacgattcaggggggtgaggtgctgctcgatcgcaccctggcctatcccacctctgcg
gtcaattttttagctggactgcagggagcggcgattgtccagtggcatcggcgaggtaaa
tatctactggcagaattggatcgagaaggcagggaagatggggaaggtgcgggagaggta
cgaggtgtgaggcacgaggcacgagaaaaaattgcttcacaagccacaaaccacgaacca
cgaaccaacagactgccaggccaaaatccaaaatccaaaatccaaaatccttctcccgca
ggtttcctcggcgttcatctccgaatgaccggacagttactctgggtcgatccagcagaa
ccactgccgaaacatactcgtgtacggctcttgttcaccagtgggtatgaattgcgcttt
gtggatcagcgtacctttgggcagatgtggtgggtgccgccgggaatggccccggaggag
attatgactgggttacaaccgctagggccagaacccttttcggaggagttttccgtttcc
tacctgtatgagcagttacaccatcgccatcgcccgattaaaagtgcgctgttagatcag
gcgatcgtcgcaggaattggcaacatttatgcagacgaggcattgttcctgagcggaatt
cgccctgaaaaactgtgtactcgcctgagccggaatcaggtcaggcagcttcatgccaat
attgtgcaggttctgctggacagtattgaggccaaaggcacaaccttcagcaccttccgt
aatgtggagggggtgaacggcaattatggtgggagagcctgggtttacgcccgtgatggg
caaccctgtcgcacctgtggtactgtgattgcgcggttaaaactggcggggcgatcggcc
catttttgtcccaaatgccagaaatag
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