Leptodesmis sichuanensis: KIK02_18215
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Entry
KIK02_18215 CDS
T07779
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lsc
Leptodesmis sichuanensis
Pathway
lsc03410
Base excision repair
lsc03430
Mismatch repair
lsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KIK02_18215 (recJ)
03430 Mismatch repair
KIK02_18215 (recJ)
03440 Homologous recombination
KIK02_18215 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsc03400
]
KIK02_18215 (recJ)
DNA repair and recombination proteins [BR:
lsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KIK02_18215 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KIK02_18215 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KIK02_18215 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UIE36919
LinkDB
All DBs
Position
complement(3874371..3876782)
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AA seq
803 aa
AA seq
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MPQLPVQWQLQSIDPPPEAFVQALRLCVACDSGKYLAQLLWQRGIQQPEQLKGYFHARDY
QPTSPFAFGQEMEWAVERLQRARDNAEVVAIWGDFDADGVTATAVLWDGLGQFFTQQKTL
FYYIPNRLTESHGLSQVGIDLLHSKGCQLLVTCDTGSTNLTEIEYAQSLGIDVIITDHHT
LPSARPPVTAILNPRYLATDHPLAALSGVAVAYKLVEALYSVLPDVPQKPLQELLDLVAI
GLIADLVELKGDCRYLAQIGIQQLQRQANPATATRPGVAKLLEFCKRSGDRPTDISFGIG
PRINAVSRIQGDAHFCVELLTSQDQHLCSHLAEATELANTRRKALQKEVVQQVTSRLSQL
DLSTTSVIVLADEQWQPGVLGLVAGQIAQEYGRPTILLSVEGAGIEDWGLGIGVRPSTPP
PLLARGSARSLNNIDLYQLIQGQEHLLHRFGGHPYAAGLSLPLENLPLFTEAINQHLRQL
ADSTGSGLSLMVDLVVTVKELGKELFQELKWLEPCGMGNPTPKLLIRDCWFEKVWNQKLR
DRTGRKVEYIKTEFELWDSSVTKGFPGVWWGHYREDIPTGRCDAVVELDFNTYANESKGI
KPHYEVRLIAVRPAETGGLTPAIAPHSNLLDWRGAALAHAPTDLNPLIMTQCPHSWTELQ
LWFRRAEQAQRPLAIAYPAPTLIPPLDIWQQLVGIAKYLSRTAQTATRQQLLDKLEIGDR
ALQLGFQTLTQLGFTVTHQEPGFQITWQPAELTSNQNLTEAVEQFLLAVKEDQFRRQYFY
QTPVETLRAMVEAKFAIDELIQE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaactacctgtccaatggcaacttcaatctatcgatccaccgccggaggcattt
gttcaagctctgcgcttgtgtgttgcctgcgactctggaaagtatctggcccaactcctc
tggcagcgaggcattcagcagccggaacagttaaaaggctatttccatgccagggactac
cagcccaccagcccgttcgcctttggtcaggagatggagtgggccgtagagcggttgcag
cgggctagagataatgctgaagttgtggccatctggggagattttgatgcggatggagtg
acggctacggcagtcctgtgggatggattagggcaattttttacgcagcagaaaaccttg
ttttattacattcctaatcggctgacagaatcccatggactgtctcaggttgggattgat
ctgctgcattccaaaggctgccaactactcgtcacctgtgatacgggcagcaccaatctg
actgaaattgagtatgctcagagcctgggaatcgatgtgattatcaccgatcatcacacg
ttgccctcagcccgtccgcctgtcacagccatactgaatcctcgttacttagctactgac
cacccgttagcggctttatccggggtcgctgtggcttacaaactggtagaagccttatat
agcgtcttacctgatgttcctcagaagccgctgcaggaattgctggatctggtggcgatc
ggcttgatcgcggatctcgtagaactgaagggggattgtcgctatctggcgcaaatcggc
attcaacaattgcagaggcaagcaaatccagctacagccactcgccccggtgttgctaaa
ttgctggaattttgcaaacggagtggcgatcggcccaccgatatctccttcggcatcggg
ccacgtattaacgccgtgagccggattcagggggatgctcatttctgtgtcgaactgttg
accagccaggatcagcacctgtgtagccatctggctgaagccactgaacttgccaatact
cgccgcaaagctctgcaaaaggaagtcgtacaacaagtgaccagtcgcctttctcaattg
gatctgtctaccaccagcgtcattgttctggccgatgagcaatggcaaccgggagtgctg
ggtctggtcgctggacagattgctcaggagtacggtagaccgacgattttgttaagtgta
gagggggcggggattgaggactggggattggggattggggttcgcccctccactcctcca
cccctcctcgctcggggttcggcgcgatcgctgaacaacatcgacctctatcaactgatc
cagggacaggaacatttgctgcatcggtttggggggcatccctatgcggcaggattaagt
ttgccgctggaaaatttgcccttgtttacggaggcgatcaatcagcacttgcggcaactg
gctgactcgactggaagtgggctatccctgatggtggatctggtggtgacggtgaaggag
ttgggtaaggagttatttcaggaactgaagtggctggaaccttgtggcatgggcaatccg
actcctaaactgctaattcgggattgctggtttgagaaggtgtggaatcaaaaactgcgc
gatcgcaccggacgcaaggtggagtacatcaaaaccgagtttgaactgtgggatagctca
gtcactaaaggatttccgggagtgtggtggggccattatcgggaagatatccccacaggg
cggtgtgatgccgttgtggaattggactttaatacctatgctaatgagtccaaaggcatc
aaacctcactatgaagtgcggctcattgccgttcgtcctgctgagacaggcggtttaacc
cctgcgatcgcccctcattcaaacttactggattggcgcggtgcggctctggcccatgct
cccacagacctgaatccgctgatcatgactcagtgcccccatagttggacagaactacaa
ctctggtttcgccgcgctgaacaggctcaacgtcctctggcgatcgcctatcctgccccg
actctgattcctccactggacatctggcagcagcttgtaggaattgccaaatacctcagc
cgcacggcacagacggccactcgccagcaattattagacaaactggaaattggcgatcgt
gccttgcagcttggctttcagaccttaacgcagcttggctttaccgtgacccatcaagaa
cctggcttccaaatcacctggcagcccgccgaattaaccagcaatcagaatctgaccgag
gccgtagagcaatttctgctggctgtaaaagaagaccagtttcgtcgccagtatttctac
caaactcctgtggaaacgttgagagcgatggtagaagcaaaatttgcgatcgatgaatta
atccaggaatga
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