Leptodesmis sichuanensis: KIK02_24095
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Entry
KIK02_24095 CDS
T07779
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lsc
Leptodesmis sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsc03009
]
KIK02_24095 (rimO)
Enzymes [BR:
lsc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KIK02_24095 (rimO)
Ribosome biogenesis [BR:
lsc03009
]
Prokaryotic type
ribosomal protein modification factors
KIK02_24095 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
UIE40715
LinkDB
All DBs
Position
5157553..5158908
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AA seq
451 aa
AA seq
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MGNKPTIAVSHLGCEKNRVDTEHMLGLLVQAGYSVDTNEDLADYVIVNTCSFIQAAREES
VRTLVELAEAHKRIVITGCMAQHFQEELLEEIPEAVALVGTGDYHKIVEVIERAESGERV
KEVSPEPTYIADETTPRYRTTTEGVAYLRIAEGCDYRCAFCIIPHLRGNQRSRTIESIVT
EAQQLATEGVQELILISQITTNYGLDIYGKPQLAELLRALGEVDIPWIRMHYAYPTGLTP
DVIAAIRETPNVLPYLDLPLQHSHPEVLRAMNRPWQGQVNDQIIERIKAAIPNAVLRTTF
IVGFPGETEKHFEHLMQFVQRHEFDHVGVFTFSPEEGTPAYNLPQQLSQAVMESRREALM
QIQQPISLKRNRLEIGKVVNVLIEQENPETGELIGRSARFSPEVDGLVYVSGEAQLGTLV
PVVIQDADVYDLYGRVAVAADLFRAPPLTVP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaagccaacaattgctgtctcacacctgggatgcgagaaaaatcgggttgat
acagaacatatgctgggtctactggtacaagccggatactcagtcgatacgaacgaagat
ctcgcagattatgtcattgtcaatacttgtagctttatccaggcagcccgtgaagaatcg
gtgcgtaccctggtggaactggcagaagcccataagcgaattgtgattaccgggtgtatg
gcccaacactttcaggaagaactgttagaagagattcctgaagcggttgccctggtagga
accggggattatcacaaaatcgtcgaggtgattgaacgggcagagtccggcgagcgggtt
aaggaagtttctcctgaacccacttatattgctgacgaaaccactcctcgttatcgcacg
accactgagggtgttgcttatctgcggattgccgaaggctgtgactatcgctgtgccttc
tgtatcatccctcacctgcggggaaatcaacgatcgcgcacaattgagtcgatcgtgacc
gaagcccaacaattggccacagaaggagtgcaggagctgatcctgatctcccagattacg
accaattacggactggatatttacggtaagccccaactggccgagttgctgcgtgctctt
ggtgaggtggatattccctggatccggatgcattacgcttatcccacgggcctcaccccc
gacgtgatcgccgcgattcgagaaaccccgaatgtcttgccctacctcgacttgcccttg
cagcactctcaccctgaagtgttaagggccatgaatcgtccctggcaggggcaggtgaat
gaccagattattgaacgtatcaaagccgcgatccccaatgccgtgctgcgaaccactttc
attgtgggatttcctggtgaaacggagaagcacttcgagcatttgatgcagtttgttcag
cgtcacgagtttgatcatgtaggcgtatttactttttctccagaagagggaaccccggcc
tacaacttaccccagcaattgtctcaagccgttatggagtcccggcgggaggcactgatg
cagattcaacaacctatttctctaaaacgaaatcgtttggagattggcaaagttgtgaat
gtgctgattgaacaagaaaacccagaaacaggcgagttaattggtcgctcggcccggttt
tctccagaagttgatggactcgtatacgtatcgggagaggcacaattggggactttagtt
ccggttgtgattcaggatgccgatgtgtatgacctctatggtcgtgttgctgtcgcagca
gatttgtttcgcgctccccccctgactgtgccataa
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