Litorilituus sediminis: EMK97_00390
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Entry
EMK97_00390 CDS
T05852
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EMK97_00390 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_00390 (ruvB)
Enzymes [BR:
lsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EMK97_00390 (ruvB)
DNA repair and recombination proteins [BR:
lsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EMK97_00390 (ruvB)
RecFOR pathway proteins
EMK97_00390 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_18
AAA_16
AAA_3
AAA_14
AAA_22
nSTAND3
Rad17
NTPase_1
AAA_2
AAA_17
RNA_helicase
Sigma54_activ_2
Bac_DnaA
AAA_28
ABC_tran
NB-ARC
AAA_24
DUF815
TIP49
NPHP3_N
TsaE
DUF5784
Motif
Other DBs
NCBI-ProteinID:
QBG34306
UniProt:
A0A4P6P041
LinkDB
All DBs
Position
90329..91339
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AA seq
336 aa
AA seq
DB search
MIEADRLIEPVATVEDESVDRAIRPKMLQDYTGQAHVKAQMEIFIPAARNRGEPLDHLLI
FGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDILFIDEIHRLSP
AVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRDRFGIVQR
LEFYNVADLTSIVARSGHFLNLNIDEQGAFEVARRSRGTPRIANRLLRRVRDYADVKTQG
VVSQDTAAAALDMLEVDNEGFDIMDRKLLHAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFLQRTPRGRIATDKAYQHFAMERPKDS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcggatcgcttaattgagccagttgctactgtggaagatgaaagtgttgat
agggctattcgcccgaaaatgctgcaagactatactggtcaagctcatgtgaaagcacaa
atggaaatttttattccagcagcgagaaatcgtggtgagccacttgatcatttacttatt
tttggtccgccaggtttaggtaaaaccaccttagccaatattgttgccaatgaaatgggc
gttaatattcgtactacctcgggtcctgtacttgaaaaagccggtgatttagccgcgctt
ctaaccaacttagaagaaaatgatattttatttattgatgaaattcatcgccttagccca
gccgtagaggaagtgctttaccctgcaatggaagattaccagttagatatcatgataggc
gaggggccggccgcacgctctattaaacttgatttaccgccatttactttaattggtgct
accacccgagctggcgcactgacttcaccgttaagggatcgctttggtatagtgcagcgc
ctagaattttataacgttgcagatttaactagcattgttgctcgctcaggacacttttta
aatttaaacattgatgagcaaggcgcttttgaagtggctaggcgctcacgtggcacgcct
agaattgctaatcgtttattgcgccgagtgcgtgactatgccgacgttaaaactcaaggt
gttgttagccaagataccgccgctgcagcattggatatgctcgaagtggataatgaaggc
tttgatatcatggatagaaagttactgcatgctatcattgataagtttatgggcggacct
gtaggtttggataatttggcggctgcaattggtgaagagcgtgaaaccattgaagatgtt
ctagagccatttttaattcagcaaggttttttacaacgcacgccaagaggcagaattgca
accgataaagcctatcaacactttgcaatggagcgacctaaagatagttga
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