Litorilituus sediminis: EMK97_01430
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Entry
EMK97_01430 CDS
T05852
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EMK97_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_01430
Enzymes [BR:
lsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EMK97_01430
DNA repair and recombination proteins [BR:
lsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EMK97_01430
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EMK97_01430
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EMK97_01430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBG37673
UniProt:
A0A4P6P7U9
LinkDB
All DBs
Position
complement(317899..319353)
Genome browser
AA seq
484 aa
AA seq
DB search
MQTSDCESQPTILWHDYETWGVSPKYDKPSQFAGIRTDLELNIIGEPEMFYCQPPVDYLP
HPEACLVTGITPQKAQAEGLTEAEFAARIQALFSQPNTCVAGYNNIRFDDEVSRYLFYRN
FYDPYAREWQNGNSRWDIIDMVRACYALRPEGIEWPTIERDGEQVVSFRLELLTQANGIA
HEAAHDAMSDVYATIAMAKLIKEKQPKLYEFIFNLRNKKQVAELLNVADMTPVVHTSSKI
SSAHGCTSWFAPISYHPVNKNAVICVDLARDISPLLELTANEIKTRLYTRYDDLAPNEKP
IPVKLIHTNKCPVIAPAKTLLPENAERLTIPREMCLENLQRLKQHTELRDKLSDVFAAES
FDNEQVDAEHALYGGNFFSHSDKAQMDILHGLAPEQLASHPFQFQDERLTTLLFRFRARN
YPHTLTNDEQQKWQQYCQNKLLYGGKGILSADEFMIKIENLAHEHEEDKGKMSVLKALYD
YIQG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtgactgtgaatctcagcccaccatcctttggcatgattatgaaacctgg
ggggtatcgcccaaatatgacaaaccatctcaatttgcgggtattcgtaccgatttagag
ttaaatattattggtgagcctgagatgttttactgtcagccgcccgttgattatttaccg
catcctgaggcatgccttgttactggtattactccacaaaaagcacaggcagaagggtta
accgaagcagagtttgccgcgcgcattcaagccttattttcacaacccaatacctgtgtt
gccgggtataacaatattcgctttgatgatgaagttagtcgctatcttttttatcgcaac
ttttatgatccttacgcacgcgagtggcaaaacggcaatagccgttgggatattattgat
atggtgcgagcttgttatgcgcttcgccctgaaggcatagaatggccaaccattgagcgc
gatggtgagcaagtggttagctttcgcttagaattattaactcaagccaatggcatagca
catgaagcagcccatgatgccatgagtgatgtctatgccactattgccatggctaaatta
attaaagaaaagcagcctaagttatatgaatttatttttaatcttagaaataaaaaacag
gtagcagagctgcttaatgtcgctgatatgacgccagtggtgcatacctcatcaaagatt
tcttccgcacatggctgtactagctggtttgctcctattagttatcatcctgttaataaa
aatgctgtgatatgtgttgatcttgctcgtgatattagccctctgcttgaactcaccgct
aacgaaataaaaacacgcttatatactcgctatgatgatttagctcctaatgaaaagcca
atcccagtaaagttaatccataccaataaatgcccggtcatagcaccagcgaaaactctg
ttaccggaaaatgctgagcgcttaactattccaagagaaatgtgcttagagaatttgcag
cgattaaagcaacatactgaattaagagataaactaagtgatgtcttcgccgctgagagt
tttgataatgaacaagtcgatgccgagcatgccctttatggtggcaatttctttagccac
agcgataaagcgcaaatggacattctgcatggcttagcgcctgagcaattggcaagccac
ccatttcaatttcaagatgagcgactcactaccctgctatttcgttttagagccagaaat
tacccacacacactcaccaatgatgagcaacaaaagtggcaacaatattgtcaaaataaa
ctgctctatggcggtaaaggtatcctaagtgccgacgagtttatgataaaaattgaaaac
ttggctcatgagcatgaagaagataaaggtaaaatgtctgttcttaaagccttatatgac
tacattcaaggttga
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