Litorilituus sediminis: EMK97_01900
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Entry
EMK97_01900 CDS
T05852
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
lsd
Litorilituus sediminis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsd03032
]
EMK97_01900 (ihfB)
03036 Chromosome and associated proteins [BR:
lsd03036
]
EMK97_01900 (ihfB)
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_01900 (ihfB)
DNA replication proteins [BR:
lsd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EMK97_01900 (ihfB)
Chromosome and associated proteins [BR:
lsd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EMK97_01900 (ihfB)
DNA repair and recombination proteins [BR:
lsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EMK97_01900 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
VWA_3
UPF0181
HU-DNA_bdg
CEP76_N
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
QBG34582
UniProt:
A0A4P6P5D4
LinkDB
All DBs
Position
422980..423267
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AA seq
95 aa
AA seq
DB search
MTKSELIERLADKLSHLSAKDVEKSIKEILELMAQSLSKGERIEIRGFGSFSLHYRAPRV
GRNPKTGESVELSGKYVPHFKPGKELRERVNLSAA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagaactcattgagagactggcagataaattatcacatttatcagctaaa
gatgttgaaaagtctattaaagaaattcttgaattgatggcgcaatctttatctaaaggt
gagcgtatagaaattagaggttttggtagtttttcattacattatagagcaccaagagtt
ggcagaaacccaaaaactggtgagtctgtagagttaagtggtaaatatgttccacacttc
aagcctggtaaagaattacgcgaaagagtgaatctttctgcagcttaa
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