Litorilituus sediminis: EMK97_02435
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Entry
EMK97_02435 CDS
T05852
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EMK97_02435 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_02435 (recC)
Enzymes [BR:
lsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EMK97_02435 (recC)
DNA repair and recombination proteins [BR:
lsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EMK97_02435 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBG34679
UniProt:
A0A4P6P3U4
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All DBs
Position
complement(522019..525444)
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AA seq
1141 aa
AA seq
DB search
MIYLYPANKMENLLFLFDRISQLSPLGVFNQEIVLVQNPGMQHWLNLSIAKQRGISMNVS
YALPAQYLWKLMRELASDENVPVQSPYSREVLCWRICRLLSSNKVLEDEDFTSVNQYWQL
KDSEHSRHFEQQQAQLKRYQLAVQLADLYEQYLIFRPDWLDAWQQGSLNSTLKDFTNQQT
DVRWQAKLWAMLTEEIPYNPVTLVDDAINNLANKKSILPKRLSIFGLNTMAPMWLSFINQ
LSEHIDVHFFHLNPCFSYWGDIISEKLAFKQIQAWTDDVTQLETHVGNPLLANFGQQGRE
FVSLLQDYSTFNIEAFEQLNDTEEQTEQLSVLAHVQQDILTLTDKRSQAINKQDDSITIT
SCHSALREVQGLHDFLLHQFNQDSELTPKDVLVMCPKIEDYAPYVHAVFSRGWQDLDSNI
PPLPCSIADRNAIDSDPLVASFVDLLNLPDSRFQVSQLLALLRLPAIASRFSVPVESIDK
ISHWLAKSAVHWGIDSSHKQSFIGNDANDNYTWHQGLTRLLRGFAFADSQSIYQDQLVLA
LVEGDDAVLLGQLLLFIEQLQQFTLLLTQARTPAAWHSFLTQQLENLIDEKVNAESEASV
DCILQAINSLVEYCQHAGYEQDIELSIVIDFLTQHFSQGDASRQFMVGQVTFCSMLPMRS
IPFKVIAVLGLNDGEFPRQRQPLTFDLMANTPARLGDRSRRGDDRYLFLEAIISARQTLY
LSFQGRNIRNNSVKQPSLVLKEFMDYLTAGYGWSFEREQQSSSDLRELAMQAYSQHNYTS
KYASFDAKWFNLGQAHESVQQGQGHSSQLKVTDDYPEHIKLSLDELVAFFMHPSKYFAQK
QLQLYFNEQDQVLSDDEPFAIDQLQSYLVRQALVQANLEDKTEQNSNLVLKEAQLSGYFP
DQPNTEQVFQHWQDDARDFVSEISADNKNDAIAIDCQLSVDIMLDDKHQVSFDLTHKFLL
KDNCLLRYRSSSAKAKDIFTLYIEQLFILVWQQQVDLPSLATIQAPLMDVSHSKGFYFNT
KAQQVEHFVLESAAIDSQHLKQLLRVFLSGLQQPLLLNASIAHMALQKKRGKVEPMTQDK
FASFWHGSHNLPGFNQDPYIDYFWPDIVSYTDIETELMTLYGPVYNGVVKVTDSQKKRSQ
D
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
ttgatctatttatatcctgccaacaaaatggaaaatttactgtttctttttgacaggatt
tctcaattatcgcctttgggtgtgtttaaccaagaaattgttttagtacaaaatcccggt
atgcagcattggcttaatctgtctattgccaaacagcgtggtattagcatgaatgttagt
tatgcgttacctgcgcaatatctatggaagctaatgagagagctggctagcgatgaaaat
gtgcctgttcagtcaccgtactctagggaagtactgtgttggcgaatttgtcgcttatta
agctcgaataaagtactggaagatgaagatttcaccagtgttaatcagtattggcagcta
aaagatagtgagcatagtcgtcattttgagcagcaacaagcgcaattaaaacgttatcag
cttgcagtgcagctagctgatttatatgagcagtatttaatctttaggccagattggtta
gatgcatggcaacaaggctcacttaatagcactttgaaagactttacaaaccagcaaacg
gatgtgcgatggcaggctaagttatgggcgatgttgaccgaggaaattccctataaccca
gtaactcttgttgatgatgcgataaacaatctagccaataaaaaatcaattttgcctaag
cgtttaagtatatttggtttaaatactatggcgcctatgtggcttagctttatcaatcag
ttaagtgagcatattgatgttcacttttttcatttaaacccttgttttagttactgggga
gatatcatcagtgaaaagctggcctttaaacaaattcaagcctggaccgatgacgttact
cagctagaaacacatgttggcaatccgctgttggctaattttggccaacaagggcgagag
tttgtttctttattgcaagattacagcacctttaatattgaagcgtttgagcagttaaat
gataccgaagagcaaacagaacaattatctgtattagcgcacgtacaacaggatatatta
accttaacagataaacgtagtcaggcaatcaataaacaagatgattcgatcaccatcacc
agttgtcatagcgcgcttagagaagtgcagggcttacatgactttttattacatcaattt
aaccaagacagtgaattaacaccaaaagatgttttggttatgtgccctaaaatagaagat
tatgcgccttatgttcatgcggtgtttagtcgaggctggcaagacttagatagtaatatc
ccgccattaccttgttcaattgctgatcgcaatgctattgatagcgaccctctggtggca
agttttgttgatttattaaacctaccagatagccgctttcaagtgagtcaattacttgca
ctgctgcgtttacctgccattgccagtcgcttttctgttcctgttgagtcgatagataaa
atcagtcattggttagcaaagtctgcggttcattggggcattgatagttcacataaacaa
agttttatcggtaatgatgccaatgataattacacttggcatcaagggctaacaagactc
ttgcgaggttttgcttttgctgatagccaaagtatttatcaagatcaattagtgctcgcg
ctagttgaaggtgatgatgccgtattgcttggtcaattgctcttatttattgagcagtta
caacaatttactttattacttacccaagccagaacgcctgctgcttggcatagcttttta
acgcaacaacttgaaaatttaattgatgagaaggttaacgctgaaagtgaagcaagtgtt
gattgtattttacaagcgattaattcgctggttgagtattgccagcatgcgggctatgag
caagatattgaactaagtattgtgattgactttttaacgcagcatttcagtcaaggagat
gccagtcgacagtttatggtgggtcaagttaccttttgctctatgctacctatgcgcagt
attccctttaaagtcattgcggtgctgggcttaaatgatggcgaatttccaaggcagcgt
cagccgctaacctttgatttaatggctaatactccggctcgattgggagatcgctctcgt
cgtggggatgataggtatttgttcttagaggcgattatatcagcgaggcaaaccttatac
ttaagttttcaagggcgtaatataagaaataatagtgtgaaacaaccttctttagtgctg
aaggagtttatggactacttaactgcaggttatggttggtcatttgagcgcgagcagcaa
tctagctctgatcttagagagttagctatgcaggcatatagtcaacataactataccagt
aagtatgcaagttttgacgccaaatggtttaacttaggccaagcgcatgaaagtgttcag
caaggccaagggcattcatcacaacttaaggtaactgatgattaccctgagcatattaag
ctttcgcttgatgagctcgtggcattttttatgcacccatctaaatactttgcgcaaaaa
cagttgcagctttattttaacgagcaagatcaggtgttaagtgatgatgagccgtttgcc
attgatcagttacaaagttatttagtcaggcaagccttggtacaggcgaaccttgaggat
aagacagagcaaaacagtaacttagtgctaaaagaggcacagttatcgggctattttcct
gatcagccaaatacagagcaagtatttcagcattggcaagatgatgccagagactttgtt
agtgagatcagcgcagataataaaaacgatgcgatagcaattgattgtcagctaagtgtc
gatattatgcttgatgacaaacaccaggttagctttgatttaacgcataaatttttgtta
aaagataactgcttattacggtatagaagttcaagcgctaaggcgaaagatatatttact
ttatatattgaacagttatttatcttagtttggcagcaacaggtagatttaccatcacta
gcgacaatacaagcacctttaatggatgttagccactcaaaaggcttttactttaatact
aaagcgcaacaagtagagcattttgtgcttgagtctgcggctattgatagtcagcatctt
aagcaattattacgagtatttttatcaggcttacaacaaccactattgttaaacgctagt
attgctcatatggcgctacaaaagaaacggggcaaagttgagccaatgacacaagataag
ttcgcatcattttggcatggcagtcataacttacctggttttaatcaagacccttacata
gattatttttggcctgatattgttagctatacagacatagaaactgagctgatgacatta
tatgggccagtctataacggcgttgtcaaagtaactgatagtcaaaagaagcgctcacag
gattaa
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