Litorilituus sediminis: EMK97_03990
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Entry
EMK97_03990 CDS
T05852
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lsd
Litorilituus sediminis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsd03016
]
EMK97_03990 (truB)
Enzymes [BR:
lsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EMK97_03990 (truB)
Transfer RNA biogenesis [BR:
lsd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EMK97_03990 (truB)
Prokaryotic type
EMK97_03990 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QBG34954
UniProt:
A0A4P6P1R8
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All DBs
Position
complement(881862..882809)
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AA seq
315 aa
AA seq
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MAKRRKGRPINGVLLLDKPYDMSSNHALQAVKRIYFAQKAGHTGALDPLATGMLPICLGE
GTKFSQFLLDTDKTYQVTAKLGIRTTTSDADGDIVSEKPVDVSEAQLMAALDSFRGTTKQ
VPSMYSALKYQGQPLYKYAREGVEVPREARDITVFSLEVLRFEGDEVELTIHVSKGTYIR
TIVDDLGELLGCGAHVADLRRLAVGSYPIDKMVTLEHIERLLEQAKESGVTPSTLLDPLL
LPMETAVVGMPAVYIDDMSANFLRHGNPVQAYNAPSEGSVQVFVGEDETDAQAEFIGVGA
INDDGLVAPKRIVVL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaagaaaaggccgcccgataaacggtgttttattgctagataaaccgtat
gacatgtcgtcaaaccatgccttacaagcagtaaaaagaatatattttgctcaaaaggca
ggacataccggggcgttagatccgcttgcaacaggcatgttgccaatctgtttaggggaa
ggcactaagttttctcagtttttattagatacagataaaacttatcaagtgacagctaaa
ctcggtattagaacaacaaccagtgatgccgatggtgacatcgtcagcgaaaagccagtt
gatgttagtgaagcacaattaatggctgcattagatagttttcgaggtactaccaagcaa
gtgccatctatgtattctgcgcttaaatatcaaggccagccattatataagtatgcgcgt
gaaggtgttgaagtgccgagagaggctcgtgatatcaccgtattttcactggaagtgtta
cgctttgaaggtgatgaggttgaattaaccattcatgtatcaaaaggcacttacattcgt
accattgtagatgacttaggtgagctgttaggttgcggtgctcatgtggctgatttacga
cgtttagctgtcggcagttatccgattgataaaatggtcaccctagagcatatcgagcgc
ttattagagcaagctaaagagtcaggtgtgacgccatctactttattagatccgctgcta
ttgccaatggaaaccgcggttgttggcatgccagcagtttatattgatgatatgtcagcg
aatttcttacgccatggtaatccagttcaagcctataatgcgccgagtgagggcagtgtt
caggtgttcgttggtgaagatgaaactgatgctcaagcggagtttattggtgttggtgca
attaatgatgatggtttggttgcgcctaagcgaattgtcgttttataa
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