Litorilituus sediminis: EMK97_05240
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Entry
EMK97_05240 CDS
T05852
Name
(GenBank) phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd00260
Glycine, serine and threonine metabolism
lsd00270
Cysteine and methionine metabolism
lsd00680
Methane metabolism
lsd01100
Metabolic pathways
lsd01110
Biosynthesis of secondary metabolites
lsd01120
Microbial metabolism in diverse environments
lsd01200
Carbon metabolism
lsd01230
Biosynthesis of amino acids
Module
lsd_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
EMK97_05240
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EMK97_05240
00270 Cysteine and methionine metabolism
EMK97_05240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsd04147
]
EMK97_05240
Enzymes [BR:
lsd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
EMK97_05240
1.1.1.399 2-oxoglutarate reductase
EMK97_05240
Exosome [BR:
lsd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EMK97_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
ACT_AHAS_ss
ACT
NAD_binding_2
AdoHcyase_NAD
ACT_4
XdhC_C
ACT_9
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
QBG35163
UniProt:
A0A4P6P223
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Position
1164454..1165707
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AA seq
417 aa
AA seq
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MNPETQNSLAKEKIKILLLEGVHESAVEELKLKGYSNIEYLKTSLAQDELIEKIADVHFI
GIRSRTQLTDQVLSHAKKLVAIGCFCIGTNQVDIQSAQKRGIPVFNAPFSNTRSVAELVL
GETLLLLRGIPEKSAKAHRGEWFKSAAGSVEARGKTLGIVGYGHIGTQLGILAETLGMRV
RFYDIETKLPLGNASQVFSLHALLAEADVVSLHVPETAQTQDMISTAEFNAMKDGAIFIN
ASRGTVVDIDALSEALTSKKVAGAAIDVFPVEPKGNDEEFISPLRAFDNVILTPHIGGST
KEAQANIGLEVASKLAKYSDNGSSLSAVNFPEVSLPEHAVAGEPSTSRLLHIHHNQPGVL
TQINQAFAEHNINIAAQYLQTDDKIGYVVIDIETSDSAQALKALKAVDGTIRARILH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaaactcaaaattcattagcaaaagaaaaaatcaagatactactccttgaa
ggcgtccatgaaagtgccgttgaagagttaaagttgaaaggctactccaatattgagtac
cttaaaacctcccttgcccaagacgaattaattgaaaaaattgccgacgtacactttata
ggtattcgctctcgcacacaattaactgaccaagtacttagccacgccaaaaagctggtt
gctattggttgtttctgtatcggcactaaccaagtagatatccagtcagcacaaaagcgt
ggtattcctgtcttcaacgcaccattttctaatacgcgctctgttgctgaattagtcctt
ggcgaaacgctactgctactgcgtggtattcctgaaaagagcgctaaagcacaccgaggc
gaatggtttaaatcagctgctggctcagtagaagcgcgtggcaaaacactaggtatcgta
ggttatggtcatataggaacgcaattaggcattttagcagaaaccttaggaatgcgagtt
cgtttttatgatattgaaaccaagctgccgcttggcaatgctagccaagtattctctctt
cacgccttattagctgaagctgatgtagttagtttgcatgtgcctgaaacagcgcagaca
caagatatgatcagcacagcagaatttaatgccatgaaagatggcgcaatatttatcaac
gcctctcgcggtactgtggttgatattgacgcattaagtgaagctttaaccagcaaaaaa
gtagctggtgctgcaattgacgtattccctgtcgagccaaaaggcaacgatgaagagttt
atctcaccactgcgcgcctttgataatgttattttaacaccgcatattggtggtagtact
aaagaagcgcaagcaaacattggccttgaagtagcaagtaaattagcgaaatactctgac
aatggctcaagtttatctgcggtgaacttccctgaagtatcacttcctgagcacgcagta
gctggtgagccaagcacaagccgcttactgcatattcatcacaaccagccaggcgtgcta
actcaaattaaccaagcatttgccgagcacaatattaatatcgccgcacaatacctacaa
acagatgataaaattggttatgtggtaatagatattgaaacctcagatagcgctcaagca
ctaaaagcacttaaagctgtcgatggtacaattagggcaagaattttacactag
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