Litorilituus sediminis: EMK97_05385
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Entry
EMK97_05385 CDS
T05852
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
lsd
Litorilituus sediminis
Pathway
lsd02020
Two-component system
lsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EMK97_05385
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EMK97_05385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsd03021
]
EMK97_05385
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lsd02035
]
EMK97_05385
Transcription machinery [BR:
lsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EMK97_05385
Bacterial motility proteins [BR:
lsd02035
]
Flagellar system
Flagellar assembly proteins
Stator
EMK97_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
GerE
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QBG35190
UniProt:
A0A4V0ZFW2
LinkDB
All DBs
Position
complement(1194203..1194922)
Genome browser
AA seq
239 aa
AA seq
DB search
MVKAITYNNQVDKSQLLEQHTVLVKRIAYHLLARLPASVLVDDLIQSGMIGLFEAANNFD
NSKGASFETFAGIRIRGAMLDEIRRGDWTPRSVHKNSRMISDAIKELEAKLGRDVSDLEV
AEKLDISLNDYHHILSEVSTGKILGIDDLGISEDAINYADGSQADDPYQNIEQTAFKKGL
TECISSLPEREALVLSLYYDEELNLREIGQVLDVSESRVSQIHSQAMHRLKARMQSWQS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagctattacctataataatcaagtcgataaaagtcagttgcttgaacagcat
acggttttggtaaaacgcatagcctatcacttacttgccagattacctgccagtgtacta
gttgatgatcttattcaatctggaatgatagggctttttgaagcggcgaataattttgat
aatagtaaaggggcaagctttgaaacctttgctggtataagaatacgcggcgctatgctt
gatgagattcgccgtggtgattggacaccacggtctgttcataaaaatagtcgaatgata
agtgatgcaatcaaagaattagaagcgaaattaggtcgtgatgtttctgatttagaagtt
gctgaaaaacttgatatttcattaaatgactaccatcatatattaagtgaagtcagtaca
ggaaaaattctaggtatagatgatcttggtatcagtgaagatgcaataaattatgcagat
ggcagccaagcagatgatccatatcaaaatatagagcaaacagcctttaaaaagggttta
acagagtgcattagttctttacccgagcgagaagctttagtactgtcactgtattatgat
gaagaattaaatttacgtgaaattggccaagtactcgatgtcagtgagtctcgagttagt
caaattcatagtcaagcaatgcataggttaaaagctcgtatgcaatcttggcaaagttaa
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