Litorilituus sediminis: EMK97_06895
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Entry
EMK97_06895 CDS
T05852
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
lsd
Litorilituus sediminis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsd03021
]
EMK97_06895 (rpoS)
Transcription machinery [BR:
lsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EMK97_06895 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QBG35464
UniProt:
A0A4P6P2R4
LinkDB
All DBs
Position
complement(1550340..1551248)
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AA seq
302 aa
AA seq
DB search
MVTLKEEQIVEAEDAPTISKEEVSSNLDATQIYLSEIGFSPLLSAEEEVYFSRLSLKGDE
AARKRMIESNLRLVVKIARRYNNRGLPLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATW
WIRQTIERAIMNQTRTIRLPIHVVKELNIYLRASRELVQKLDHEPTAEDIAEHLDKPVSD
VNKMLRLNERIASVDTPFAGDSDKALLDVIADEKSSGPEGDLQSEDMSNNIIHWLNELNS
KQREVLARRFGLMGYEAATLEDVGSEIGLTRERVRQIQVEALKRLRDILSQQNLSIEAIF
QA
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggtcacattaaaagaagaacaaatcgttgaagctgaagacgcgcctacaatatctaag
gaagaagtttcgtcaaatttagacgcaactcagatttatctaagcgaaattggtttttcg
ccattattaagtgcagaagaagaggtttatttctcacgtttatccctaaaaggggatgaa
gctgcaagaaagcgtatgatcgaaagtaatttacgcttagttgtaaaaatagcgagacgt
tataataatcgaggcttacctttacttgatttaattgaagaaggtaatttaggtttaatt
cgagcagtagagaaatttgacccagaacgcggctttcgcttttcaacctacgccacttgg
tggattcgccaaaccatagaacgcgctattatgaatcaaacgcgcaccatacgtttaccc
attcatgtagtaaaagaactcaatatatatttacgagcctctcgtgaactagtgcaaaaa
ttagatcacgaaccaaccgcagaagatattgctgagcatttagataagcctgttagcgat
gtaaataaaatgctgcgcttaaatgagcgtatcgcttcggtagatactccttttgctggt
gattcagataaagcactacttgatgtcattgctgatgaaaaaagtagtggaccagaaggt
gacttgcaatcagaagatatgagcaacaatatcattcactggttaaatgaactgaacagc
aagcaacgagaagttcttgcccgccgctttggcttaatgggctatgaagctgcaacgtta
gaagatgtgggtagtgaaattggcttaactcgtgaacgggttcgtcaaattcaagtagag
gcattgaaacgtcttcgcgatatacttagccagcaaaacttatcgattgaagctatcttt
caagcctag
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