Litorilituus sediminis: EMK97_07360
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Entry
EMK97_07360 CDS
T05852
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
lsd
Litorilituus sediminis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsd03021
]
EMK97_07360
Transcription machinery [BR:
lsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EMK97_07360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
HTH_3
ABC_tran_CTD
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QBG35544
UniProt:
A0A4P6P2X7
LinkDB
All DBs
Position
complement(1644788..1645642)
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AA seq
284 aa
AA seq
DB search
MTTHLTPVLQNTASFDAYLSYVNSQPIVDEQQERSLFEDYQQRNDLAAAEKLVLSHLRFV
AYIARSYKGYGLPLDDLVQEGTIGLMKSVKKFSLDFGVRLSSFAVHYIKAEIQEYVIKNW
RLVKAATTKAKRKLFFNLRTLKSNTQWLSYKEKTEIAEQLQVSEEDVADMEAQFAQSDFY
LNSSVNDEGDNNASSDFILADESEAFTATLIQQDYTDKAFKQVKSIIEKLDERSRDIIEN
RWLAKEKYTHKYFSEKYGVSQERIRQIEEKALTILRTKMLAITH
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcatctaacccctgtgctacaaaatacagctagctttgatgcttatttatct
tatgtaaatagccaacccatagtggatgagcagcaagaaaggtctttatttgaagactat
caacaacgaaatgatttagcggcagcagaaaaactcgtgctctcgcatttaaggtttgtc
gcttatattgctagaagctataaaggctacggtttacctttagatgacttagtgcaagaa
gggactattggcttgatgaagtcggtgaagaagtttagcttagattttggcgtaaggttg
tctagttttgctgtgcattacattaaagctgaaattcaagaatatgttataaagaactgg
cgtttagttaaggcggcaaccaccaaggcaaagcgaaagttattttttaatttacgtaca
cttaagtcgaatacgcaatggttatcatataaggaaaagacggaaatagctgagcaactg
caagtatctgaagaagatgttgcagatatggaagcacaatttgcccagtctgacttttat
cttaattcgtcagtcaatgacgaaggtgataacaacgccagttcagattttatattagca
gatgaatctgaagcttttactgcaacgttaattcaacaagactatacagataaagcattc
aaacaagttaaatcaataatagaaaaactagacgaacgttcaagggatataatagaaaac
cgatggttagcaaaagaaaagtacacgcacaaatatttctctgaaaaatatggtgtttcg
caagaacggattagacaaatagaagagaaagctttgactatactcaggacaaaaatgtta
gcaataactcattaa
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