Litorilituus sediminis: EMK97_08400
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Entry
EMK97_08400 CDS
T05852
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EMK97_08400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_08400
Enzymes [BR:
lsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EMK97_08400
DNA repair and recombination proteins [BR:
lsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EMK97_08400
Prokaryotic type
EMK97_08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBG35729
UniProt:
A0A4P6P6C5
LinkDB
All DBs
Position
complement(1890063..1890746)
Genome browser
AA seq
227 aa
AA seq
DB search
MTIKASWQQLIAEQKSQDYFAQLQDEIASRRGQGITVFPAEQDVFNAFSFCELAEVKVVI
LGQDPYHGQDKGITQAHGLAFSVQKGVKPPPSLVNIYKELVTDIDDFTVPEHGDLTAWAE
QGVMLLNTVLTVEQGHAHSHAKLGWQHFTDAVIQTINSQNSGCVFILWGAHAQKKAKMID
QNKHLVLEGPHPSPLSAYRGFFGCQHFSKANDWLRARDKAPVSWLLE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaaagcaagttggcagcagctgatagctgagcaaaagtcgcaagattacttt
gctcagctgcaagatgaaatcgcatctcgtcgagggcaaggtattaccgtctttccagca
gagcaagatgtttttaatgcctttagcttttgtgagttagctgaggttaaggtggtgatt
ttggggcaagatccttatcatggccaagataagggcatcactcaagcacacggtttggcc
ttttcagtacaaaaaggcgtaaaaccgccaccttcactggtaaatatctataaagagctt
gtcactgatattgacgattttaccgtccctgaacatggcgatttaactgcgtgggctgag
caaggtgttatgttgttaaatactgtgctaacagttgagcaaggtcatgctcattcccat
gccaagttaggttggcaacactttaccgatgctgttattcaaaccattaacagtcagaat
tcaggctgcgtgtttattttatggggagcgcacgcccagaaaaaagccaagatgatagat
caaaataagcatttagtgcttgaggggccacacccttcgccactatcagcatatcgaggc
ttttttggttgtcagcacttttctaaagctaatgactggctgcgagctcgtgataaagcg
ccggtaagttggttacttgaataa
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