Litorilituus sediminis: EMK97_08470
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Entry
EMK97_08470 CDS
T05852
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lsd
Litorilituus sediminis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsd03016
]
EMK97_08470 (thpR)
Enzymes [BR:
lsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EMK97_08470 (thpR)
Transfer RNA biogenesis [BR:
lsd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EMK97_08470 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QBG35741
UniProt:
A0A4P6P328
LinkDB
All DBs
Position
1906483..1907016
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AA seq
177 aa
AA seq
DB search
MKRLFFALDISEHDKAVIAKWRAHHLTSSYQQSKTIPQDNFHITLAFLGLVDSSQQNRLI
TNMTQLRQQAELSGSLPLTLNQIGLFKKPQVLYIANTEIPKALVTLHAQVNNLAHKEQLP
IEERAYLPHISLFRKAKNLAIDLSNPNIQISAPSFSLYQSMSHSNGVQYTPIASWPI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattatttttcgccttggatatatcagagcacgacaaagcagtcattgctaaa
tggcgtgctcaccatttaacctctagttatcaacaaagtaaaactatccctcaagataac
tttcatatcaccttagcttttcttggcttagtcgatagcagtcaacaaaacagactcatc
acaaacatgacgcaattacgacaacaagccgaattatcaggatctttgcctttaacctta
aatcaaattgggttatttaaaaaaccacaagtgctatatatagccaatactgagatccct
aaagccttagttacgcttcatgcgcaagtcaacaatcttgcacataaagaacaactgcca
atagaagaaagagcttacctaccgcatatcagtttatttcgaaaagcgaaaaatctcgca
attgatttaagcaatccgaacattcaaataagcgctccttcatttagtctatatcaatca
atgtcacacagtaatggcgtgcaatacaccccaatcgccagctggccgatatag
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