KEGG   Litorilituus sediminis: EMK97_08725
Entry
EMK97_08725       CDS       T05852                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
lsd  Litorilituus sediminis
Pathway
lsd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMK97_08725 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsd03400]
    EMK97_08725 (uvrA)
DNA repair and recombination proteins [BR:lsd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EMK97_08725 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EMK97_08725 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 RsgA_GTPase AAA_23 nSTAND1 nSTAND3 AAA_22 AAA_21 AAA_25 DnaJ_CXXCXGXG MMR_HSR1 NACHT cobW Viral_helicase1 NTPase_1 AAA_24 Glu_synthase DUF2972
Other DBs
NCBI-ProteinID: QBG35789
UniProt: A0A4P6P6H9
LinkDB
Position
1970674..1973499
AA seq 941 aa
MKSIEVRGARTHNLKNINLEIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGEPRC
PEHNAPLAAQTISQMVDKVLELEEGTKVMLLAPVLQNRKGEHVKLLDNLAAQGFIRARID
GEVCDLSDPPTLELHKKHTIEVVVDRLKVRDDIQLRLAESFETALGLTSGTAKVAFMDDS
DKEELIFSANFACPHCGYSMQELEPRLFSFNNPAGACQTCDGLGIEQFFDSKRVIANDEL
SLAGGAIRGWDKRNFYYFQMLQALSEHYGFAIDEPFNTLSKEAQKVVLYGSGKQEIEFKY
MNDRGDVVFRKHPFEGILNNMQRRYKETESNAVREELSKYLNSQHCPDCNGSRLRLEARN
VFIDNTPLPTVAEFAIADALEFFQGLNLTGQKGQIAEKILKEINDRLGFLVNVGLNYLNL
SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRDLGNT
VIVVEHDEDAIRAADFVIDIGPGAGVHGGNVIAHGNVNDILACDDSLTGKYLSGKECIEV
PKKRHPFDKDNVVELIGASGNNLKDVDLVIPNGLMTCITGVSGSGKSTLINDTLYKLAHI
ELNGATTQEPSPYKEIKGLDKLDKVIDIDQSPIGRTPRSNPATYTGIFTAIREIFAATQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKSKRYNRETLEVLY
KGKNIHEVLDMTIEDAFEFFNAIPAVKRKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL
SKELSKRDTGKTLYILDEPTTGLHFHDIKQLLQVIHRLRDHGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVTGTPEQVAKHKTSHTAHFLKPMLG
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaagagtatcgaagtaagaggggctcgcacccacaatttaaaaaatatcaatttagaa
atcccgcgcgataagcttgtcgtgattacagggctttctggctcgggtaaatcatcactt
gcctttgacaccttatatgctgaaggtcagcgccgttatgtagagtcactgtcagcctat
gcgcgccagtttttatcgttaatggaaaagcccgatgttgatcatattgaaggcttatct
ccagcaatttccattgagcaaaaatcgacttctcataacccgcgctcaactgtgggcacc
attactgaaatatacgattacctacgtttattatatgcgcgcgtaggtgagccacgttgt
cctgagcacaatgcgccactagcggcacaaaccatttctcaaatggttgataaagtactt
gagctagaagaaggcactaaggttatgctactagcgccagtactgcaaaatcgtaaaggt
gagcatgttaagttattggacaaccttgccgcacaaggttttattcgcgctcgaatagac
ggtgaagtatgtgatttatctgatccaccaacacttgagctacataaaaagcacaccatt
gaagtagtcgttgatcgattaaaagtacgcgacgatattcaactgcgtttggctgaatca
tttgaaaccgcacttggcttaacctcaggtacggccaaagttgcttttatggatgatagc
gacaaagaagagcttattttctcggctaattttgcttgtccacattgtggttatagcatg
caagagcttgagccaaggttattctcatttaataacccagcaggtgcttgtcaaacctgt
gatggtttaggtatagagcaattttttgatagtaaacgcgttattgccaatgatgaatta
agcttggcgggcggtgcaattcgcggctgggataaacgcaatttttactacttccaaatg
ttgcaagcgctatcagaacattatggatttgccatcgatgagccatttaataccctaagc
aaagaagcgcaaaaagtcgttttatacggtagcggtaaacaagaaatcgaatttaaatac
atgaacgatagaggtgatgtggtttttcgcaagcacccatttgaaggtattttaaataac
atgcagcgccgctataaagaaaccgaatctaacgcggtgcgcgaagagctatctaaatat
ttaaatagccaacactgtccagattgtaatggcagccgcttacgccttgaggcacgcaat
gtctttattgacaacacgccattaccgaccgttgccgaattcgctattgctgatgcttta
gagtttttccaaggtttaaatttaaccggacaaaaaggccaaatagctgaaaagattcta
aaagagataaacgatcgtttaggcttcttagttaacgttggcctaaattacttaaactta
tcacgcagcgccgatactttatcaggtggggaagctcagcgtattcgcttagccagccaa
attggcgctggccttgttggtgttatgtatgtactggatgaaccctcaattggtttacac
caacgtgataatgagcgcctgcttaacaccttaattcacctacgcgacttaggtaatacg
gtaatagtggttgagcatgatgaagatgcgattcgtgccgccgactttgttattgatata
ggtccaggcgctggtgtgcacggtggtaatgttattgcccatggtaatgttaatgatatt
ttagcgtgtgatgactcactaacgggtaaatacctatcaggtaaagaatgtatcgaagta
cctaaaaaacgtcatccgtttgataaagacaatgttgttgagcttattggcgctagcggc
aataacttaaaagatgtcgatttagttattccaaatggcttaatgacctgtattaccggt
gtttctggctcaggtaaatctaccttaattaacgataccttatacaaattggcgcatatt
gaactcaatggtgctaccacacaagagccgtccccttataaggaaatcaaaggcctagat
aagttagacaaggttattgatatcgaccaaagcccaattggtagaacgccacgttccaac
ccagctacctacacaggtattttcactgccattcgtgaaatttttgctgcaactcaagaa
gcacgttcacgtggttataagccaggccgctttagctttaatgttaaaggtggtcgctgt
gaagcctgtcagggtgatggcgtaattaaagtcgaaatgcactttttacctgacgtttat
gtgccttgtgatgtttgtaagagtaaacgctataaccgtgaaacgttagaggtactttat
aaaggcaagaacattcacgaagtgctagatatgaccatagaagatgcttttgagtttttt
aacgccattcctgcggttaaacgtaagctgcaaacactgatggatgttggtttaagctat
atcaaacttggtcaatcagcaacaaccttatcaggtggtgaagcacaacgagttaagctt
tctaaagagctatcaaaacgcgataccgggaaaaccttatatattttggatgagccaacc
acaggtttgcattttcacgatatcaaacagcttttacaggttattcatcgcttacgtgat
cacggtaatactattgtggtgattgaacataaccttgatgtgattaaaaccgcagactgg
attgttgatttaggtcctgaaggtggctcaggtggtggtgaaattttagttactggcaca
cctgagcaggttgctaaacataaaacatcacacacagcgcactttttaaaacctatgtta
ggctag

DBGET integrated database retrieval system