Litorilituus sediminis: EMK97_09550
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Entry
EMK97_09550 CDS
T05852
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd00071
Fatty acid degradation
lsd00280
Valine, leucine and isoleucine degradation
lsd00310
Lysine degradation
lsd00362
Benzoate degradation
lsd00380
Tryptophan metabolism
lsd00410
beta-Alanine metabolism
lsd00640
Propanoate metabolism
lsd00650
Butanoate metabolism
lsd00907
Pinene, camphor and geraniol degradation
lsd00930
Caprolactam degradation
lsd01100
Metabolic pathways
lsd01110
Biosynthesis of secondary metabolites
lsd01120
Microbial metabolism in diverse environments
lsd01200
Carbon metabolism
lsd01212
Fatty acid metabolism
Module
lsd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EMK97_09550 (fadB)
00650 Butanoate metabolism
EMK97_09550 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EMK97_09550 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EMK97_09550 (fadB)
00310 Lysine degradation
EMK97_09550 (fadB)
00380 Tryptophan metabolism
EMK97_09550 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EMK97_09550 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EMK97_09550 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EMK97_09550 (fadB)
00930 Caprolactam degradation
EMK97_09550 (fadB)
Enzymes [BR:
lsd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EMK97_09550 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EMK97_09550 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EMK97_09550 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EMK97_09550 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
QBG35941
UniProt:
A0A4P6P3I1
LinkDB
All DBs
Position
complement(2140671..2142839)
Genome browser
AA seq
722 aa
AA seq
DB search
MIYQGNSLSAQLLEDGIVEFKFDAQGSVNKFDQATFKEFIEVIEAINNCPDAKAVMVTSA
KPAFLVGADITEFLETFKQPEEALVPWVKKASDVFDAFEDLNMPTLAAINGVALGGGCEM
TLACDFRLADTKVSIGLPEVKLGLMPGFGGTVRLPRLIGVDNAVEWMSTGKAHKAEQALA
VGLLDAVVEPENLRDSAISMLKLAIAGKLDWRAKRQPKLEPIKLSKIEAIMSFTTCKGMI
AAKAGKHYPAPMVMVNTLEQAATHDRAGAMAIENAGFAKLAKTDAATAQIGLFMADQVVK
GKAKKASKQVEKAVNKAAVLGAGIMGGGIAYQSAYKGTPIVMKDINDQALDLGLTTAAGI
LTKQVERGRMNAKKMASVLNNITPSLSYDSVKDADVVVEAVVENPKVKGIVLAEVEQVIS
EEAILTSNTSTISIDLLAKSVKRPEKFCGMHFFNPVHKMPLVEVIRGKDTSDETVASVVA
YAAKMGKSPIVVNDCPGFYVNRVLFPYFAGFSQLVLEGADFAAIDKVMEKQFGWPMGPAY
LLDVVGVDTADHCTGVMSAGFPTRMKKLENDPVSTLYSNERYGQKNGKGFYDHGKDKRGR
PSKVPAETAYQLFAENCAGKKDFSSEEIIARLMIPMVNEVIRCLEEGVVDTAAEADMGLI
YGIGFPPFRGGPIRYLETLGLDNFIAMADKYAHLGEIYQVTDGLREMAKSGKSYFFTDVK
TA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggcaacagcctttctgcccaattacttgaagacggcattgttgagttt
aagttcgatgctcaaggttcggtaaataagtttgatcaggctacttttaaagaattcata
gaagttatagaggcaatcaataactgtcccgatgcaaaagctgtgatggtgacatcagca
aagccagcatttttggttggcgcagatattacagagtttttagaaacatttaagcagccg
gaagaagcgttagttccttgggttaaaaaagcctcggatgtatttgatgcctttgaagat
cttaatatgccaaccttggcagcaattaatggtgtcgctttaggtggcggttgtgaaatg
accttagcttgtgattttaggttagctgataccaaagtaagtataggcttacctgaagta
aaattaggcttgatgcctggttttggtggtacggtgcgtttgccgcgtcttattggtgtt
gataatgccgttgagtggatgagtacaggtaaagcacataaagcagagcaagctttagcc
gttggtttacttgatgcggtagtagagccagaaaacttacgcgatagtgctattagcatg
cttaaactagcgattgctggcaaattagattggcgcgcaaaacgtcagcctaaactagag
ccaataaaattaagtaaaattgaagccattatgagctttactacctgtaaaggcatgatt
gcagctaaagcaggtaagcactacccagcacctatggtgatggtaaataccttagagcaa
gcagcaacgcatgatagagctggcgctatggcgatagaaaatgccggttttgcaaaactt
gctaaaaccgatgctgccacggcgcaaattggtttgtttatggcagatcaagtggttaaa
ggtaaagcgaaaaaagccagcaaacaagtagagaaagcagtgaataaagctgcggtactt
ggtgcgggtattatgggcggtggtattgcttatcagtcagcctataaaggtacgccgatt
gtgatgaaagatatcaatgatcaagcgcttgatttaggtttaacaactgctgcaggtatt
ttaactaagcaagttgagcgtggccgtatgaatgccaagaaaatggcgagcgttcttaat
aatattaccccaagcttaagctacgatagcgttaaagatgccgatgtggtggttgaagcg
gttgttgaaaatccgaaagtaaagggtattgtgcttgctgaagttgaacaagtgatttca
gaagaggcaatcttaacctctaatacttcaaccatttctattgatttattagcgaaaagc
gttaaacgtccagaaaaattctgtggtatgcacttctttaatcctgtgcataaaatgcca
ttagttgaagtcatccgtggtaaagatacctcagatgaaaccgtagcaagtgttgttgcc
tatgctgcgaaaatgggtaaatcacccatagtagtaaatgattgcccaggtttttatgtt
aaccgtgtgcttttcccatactttgcaggttttagccagttagtgctcgaaggtgctgac
tttgctgccattgacaaagtaatggaaaaacagtttggttggcctatgggacccgcttat
ttacttgatgttgttggtgttgatactgctgatcattgtactggtgtaatgtcagctggc
ttcccaacacgtatgaaaaagcttgaaaatgacccggtaagtaccttatatagcaatgag
cgctatggccagaaaaatggcaaaggtttttatgatcacggtaaagacaagcgcggtcgt
ccaagtaaagtaccagctgaaacggcttatcaattatttgctgaaaattgtgcaggtaaa
aaagattttagcagcgaagaaattattgcccgccttatgatccctatggtgaatgaagtg
attcgttgtttagaagaaggcgtagttgatactgccgctgaagctgatatgggcttaatc
tacggtatcggtttcccaccatttagaggtggtccaattcgttatttagaaacgttagga
ctagacaactttattgctatggctgataaatatgcgcacttaggtgaaatttatcaagta
actgatggcctacgtgaaatggctaaatcaggtaaatcatacttttttactgacgttaaa
acagcttaa
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