Litorilituus sediminis: EMK97_13560
Help
Entry
EMK97_13560 CDS
T05852
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EMK97_13560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsd03400
]
EMK97_13560
Enzymes [BR:
lsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EMK97_13560
DNA repair and recombination proteins [BR:
lsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EMK97_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
AAA_22
ProQ_C
NES_C_h
iSirtuin
nSTAND_NTPase5
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QBG36674
UniProt:
A0A4P6P5F8
LinkDB
All DBs
Position
complement(3054770..3057040)
Genome browser
AA seq
756 aa
AA seq
DB search
MTLNSQNSINFNLTLSAYLVSDCYIQVAIPVPIRQLFTYTLPISLQSPTIKVGERVLVPF
GNRQVIGIVIDISQQSEFSADKVKPVLNRLHDSFHLSKDLVTFLQLCSHYYHHPVGDVFQ
QALPVLLRQTEKTDLRPPMLWHAKQAIDEQAQQIKRDKLSKAPKQLALLTLIEKHQGISW
AELRTLGYSKAQLNALVTKELIEEKQQVLQLFNWQSSMFNQDNKLVLSPEQAVVVSAINQ
SQAQFACHLIEGVTGSGKTEVYLQVMEQTLARSKQVLVIVPEIGLTPQTLIRFEQRFNVP
ICLHHSGLNDSERLDTWLNAQQGNAAIVIGTRSAVFAPLHQLGLIIIDEEHDSSLKQQDS
FRYHGRDIAILRARQLNIPIVLGSATPSLETLQNALSGKYHYHQLKNRAGKSKAAKIALI
DNNQQQMEYGLSGSLKQEISRTIERGEQVLLFLNRRGYAPAINCQECHWIADCQRCNKPY
TLHQKQQLLICHHCGSQKRIPPQCPSCGSVRIAPLGQGTEQLESRLEELFPETSIVRIDR
DSTRKKGELAKLLQEVNDKKHQILVGTQMLAKGHHFPDVTLVAILDVDGALFSFDFRASE
HMAQLLVQVAGRSGRASKPGKVLVQSNFVDHPLLQDLVHNGYQHFARQALTERKQALLPP
FSFQALIRAEANYPSYPEKFLRSLTEHSFEQCELAGPVPAAMEKKAGKYRYHLIIQAKSR
KYLHQAVLSILTLALQNDLHKKVRWSVDIDPIDLSW
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgaacagtcaaaatagcattaatttcaacttaaccttatctgcctatctcgtg
agtgattgttatatacaagttgccattcctgtccctatacggcagttattcacctatacc
ctgccaatatcactgcaaagcccaacaataaaagtaggggaacgcgtactagtgcccttt
ggcaatcgtcaggtcattggcattgttattgacatatcacagcaaagtgaattttcagca
gataaagtgaaacctgttttaaaccgtttacatgatagctttcatttaagtaaagactta
gtaacgtttttacagctttgttcacactattatcatcaccccgttggtgacgtctttcag
caagccttaccggtattactaagacaaactgagaaaactgatctgagacctcctatgctc
tggcacgctaaacaagcgatagatgagcaagcgcaacagataaaacgtgacaagctaagc
aaagcaccaaagcagttagcactgttaaccttaattgaaaaacaccaaggcataagctgg
gctgagttacgtactcttggctatagcaaagcacagttaaatgccttagtaacaaaagag
cttattgaagaaaagcagcaagttttgcagctatttaactggcaaagctcaatgtttaac
caagataacaagctagtgctttcgcctgaacaagctgtggtagttagcgctatcaaccaa
agccaagcgcaatttgcttgtcatctaattgaaggggttactggcagcggtaaaactgaa
gtttatttgcaagtaatggagcaaacattagccagaagtaagcaagtgctggttattgtg
ccggaaattggtttaaccccacaaaccttaatacgctttgaacaaagatttaatgtacca
atttgcctgcaccactctggcttaaatgacagcgaaagattagatacttggctaaatgct
cagcaaggcaacgcagctattgttattggtacgcgctcagcggtatttgcgccgctacat
caattaggtttgatcatcatagacgaagaacatgacagttcattaaagcagcaagatagt
tttcgttatcatggccgcgatattgccattttaagggctaggcagttaaatattcctatt
gtgcttggtagcgcaacgcctagcttagaaacgctacaaaacgccttgtcaggaaaatat
cactatcaccaacttaaaaaccgcgcaggtaaaagcaaggccgccaaaatagcactgatt
gataataatcaacagcaaatggaatacggtttatctggcagtttaaaacaagagattagc
cgaaccattgaacgtggtgagcaagtattactatttttaaaccgacgaggttacgctccc
gcgataaactgtcaagaatgccattggatagccgattgccaacgctgtaataagccatac
acactgcaccaaaaacaacaactgcttatttgccatcactgcggtagccaaaagcgtatt
cctcctcagtgcccaagttgtggcagtgtgcgtattgcaccattaggtcaaggcactgag
cagttagagtctcgcttggaagaattattccccgagaccagtatagtgcgcattgacaga
gacagtacccgaaaaaaaggcgaattagcaaagctactgcaagaagtgaatgataaaaaa
catcaaatactggttggtacccaaatgttagcaaagggacatcattttcctgatgtcacc
ttagtggcaattctggatgttgatggcgcattatttagctttgactttagagccagcgag
catatggcgcaacttttagtccaagttgccggccgttcagggcgtgccagcaaacctggt
aaggtactggtgcagagtaattttgttgatcaccccttactacaagatttagtgcacaat
ggttatcaacactttgctcgtcaggcattaacggaacgtaagcaagccttactgccgcct
tttagctttcaagcgctcattcgagcagaagctaactatccatcttatccggaaaagttt
ttacgctcactaaccgagcacagctttgaacaatgtgaactggcaggcccggtacctgcg
gccatggaaaaaaaggccggtaaatatcgttatcacctgataattcaagcaaaatcacgt
aaatacttacaccaagcggttttatctatattaacactcgctttacagaatgatttgcat
aagaaggttcgctggagcgtggacattgacccgatagatcttagctggtaa
DBGET
integrated database retrieval system
