Litorilituus sediminis: EMK97_14930
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Entry
EMK97_14930 CDS
T05852
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lsd
Litorilituus sediminis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsd03009
]
EMK97_14930
Enzymes [BR:
lsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EMK97_14930
Ribosome biogenesis [BR:
lsd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EMK97_14930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBG37844
UniProt:
A0A4P6P8F5
LinkDB
All DBs
Position
3355169..3355876
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AA seq
235 aa
AA seq
DB search
MSISRSRLDRFLAKHTDYNKKSVRLLLAQKRVKVDGDLATSIEQIIDKFSVVSLDDIILQ
QNTAIYLMLHKPVGVVCATKDEQHKTVIDLLDHQDKASLHIVGRLDLNTSGLVLLTNDSR
WSEALTLPESKVEKRYLVTLAKPITADYISAFAGGMHFAYEDIITKPAKLKIINEYQAQV
RLVEGKYHQIKRMFGRFRNPVVALHRQAIGQLQLDPLLPEGQSRLLTEQEVADIF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattagtcgttcgcgcttggaccgctttttagctaaacatactgattataataaa
aaatcagtgcggttattgcttgcgcaaaagcgtgttaaagtggatggtgaccttgccact
agcattgagcaaattattgataagttttcagtagtgagtcttgatgacattattttgcag
caaaataccgcaatttaccttatgttgcataaacctgttggtgttgtttgtgctaccaaa
gacgagcaacataaaaccgtgattgatttattagatcaccaagataaagcaagtttacac
attgttggccgtttagatttaaatacctcaggcttagtgttacttactaatgatagccgt
tggtctgaagcgctcaccttgcctgaaagtaaagtagaaaagcgttatctggttacctta
gctaagccaataaccgctgattatattagtgcttttgctggtggaatgcactttgcctat
gaagatatcatcactaaaccagccaagcttaaaattatcaatgagtaccaagctcaagtg
agattagttgaaggcaaatatcatcaaattaagcgtatgtttggtcgttttcgcaaccct
gttgttgctttgcatcgtcaagcgatagggcagttgcagcttgacccactattacctgag
gggcaaagtagattgctaacagagcaagaagttgcagatatattttaa
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