Litorilituus sediminis: EMK97_15220
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Entry
EMK97_15220 CDS
T05852
Name
(GenBank) PLP-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd00300
Lysine biosynthesis
lsd00470
D-Amino acid metabolism
lsd01100
Metabolic pathways
lsd01110
Biosynthesis of secondary metabolites
lsd01120
Microbial metabolism in diverse environments
lsd01230
Biosynthesis of amino acids
Module
lsd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EMK97_15220
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EMK97_15220
Enzymes [BR:
lsd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EMK97_15220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Nudix_hydro
Motif
Other DBs
NCBI-ProteinID:
QBG36975
UniProt:
A0A4P6PBB0
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All DBs
Position
3427566..3428804
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AA seq
412 aa
AA seq
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MTTTPDWLDKSILPLLAAHDSPEHEQAYFVYQLDALKAHLAKLQQQDVVKLWFAVKANPL
SKIIQTLDSEGFDFDVASSGELSQVLAQGVPANRVLNTGPAKSKAQLTDFVNQGVQTFVV
ESLNQLIWLHEVVQDYNRSHNTALPIKVLLRVQLQWQEGEKNPLGGNSLTPFGLSVEQWQ
SVQVKDFPALDICGLHIFQWGNMLSNEKMFSLWSQMVPPLVALANDIGMSLKVLDLGGGL
GIDYLGEGKTLSWQQIVDDLAKIKSEAGVEELWLELGRFAVAECGYYVVPVVDRKVNYQQ
EQLVLAAGINHLLRPAITDQPFPVQLLRQSSAELEHFDLHGPLCTSMDKLGHLALPQDVV
VGDQLVFGYCGAYGFTESMPFFLCHQLAAEYVIENEQLSVVRVAQSATSYLA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactccagattggttagacaagagcatattgccattattggctgcgcatgac
tctccagagcatgagcaggcttattttgtgtatcaacttgatgcattaaaagcgcactta
gccaaactacaacagcaagatgtggtgaagttatggttcgctgttaaagcaaatccgctt
tcaaagataattcaaaccttggacagtgaaggctttgactttgatgtagcaagctcgggt
gaattgtcacaagtattggctcaaggcgtgccagctaatagagtattaaatactgggccg
gcaaaatctaaggcccagttaactgactttgttaaccaaggtgtgcaaacttttgttgtt
gaaagtttaaaccagctcatttggttacatgaagtagtgcaagactataaccgtagtcat
aacacggctttgccaattaaggtcttgcttcgcgtgcagcttcagtggcaagaaggcgag
aaaaacccgttaggcggtaatagtctgacgccatttggcttgtcagttgagcagtggcaa
agcgtgcaggttaaagacttccctgcgttagatatctgtggtttacatatttttcaatgg
ggcaatatgctcagtaatgaaaaaatgttttcactgtggtcgcaaatggtaccgccttta
gtggctttagcgaatgacataggtatgtcactaaaagttttagacctaggtggtggctta
ggcattgattatttaggtgaaggtaaaacgctttcatggcaacaaattgtcgatgattta
gccaagattaaatcagaagctggcgtggaagagttgtggcttgagctagggcgttttgcc
gtggctgaatgtggttattatgttgttcctgttgttgatagaaaagtgaattaccagcaa
gagcagctggtgttagcagcaggtatcaatcatttattacgcccagcaataactgatcag
ccattccctgtgcagttgcttcgacaatccagtgctgagcttgagcactttgatttgcat
ggcccgctttgtaccagtatggataaactgggtcacttggcattgccacaagatgttgtt
gttggtgatcaattagtttttggttattgcggtgcttatggctttacagaaagtatgccg
tttttcttatgtcatcagttagccgctgaatatgtcattgaaaatgagcagctgtccgta
gtgagagtcgcgcaatcggcaacaagctatttagcttag
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