Litorilituus sediminis: EMK97_15860
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Entry
EMK97_15860 CDS
T05852
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lsd
Litorilituus sediminis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsd03019
]
EMK97_15860
03009 Ribosome biogenesis [BR:
lsd03009
]
EMK97_15860
03036 Chromosome and associated proteins [BR:
lsd03036
]
EMK97_15860
Enzymes [BR:
lsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EMK97_15860
Messenger RNA biogenesis [BR:
lsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EMK97_15860
Ribosome biogenesis [BR:
lsd03009
]
Eukaryotic type
90S particles
RNase
EMK97_15860
Prokaryotic type
rRNA processing factors
EMK97_15860
Chromosome and associated proteins [BR:
lsd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EMK97_15860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QBG37096
UniProt:
A0A4P6P5Y0
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All DBs
Position
3571595..3572299
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AA seq
234 aa
AA seq
DB search
MKNNPHDLARLTKKLGYSFNDESLLLQALTHRSAKGRHNERLEFLGDSILGFVIAEALFE
KFPSHDEGDLTRMRSSLVKGVTLAKIARDFNLGECLILGPGELKSGGHRRESILEDAIEA
IIGAIYLDSDITNCKRLILTWFEKRLNVIKPGNEQKDPKTRLQEYLQGRKIALPSYEVID
TTGQSHNQQFTVRCLTEVMADEVIAKGTSRRKAEQAAAEQILALIEQASNKRKS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaataatccacatgatttagcaaggctaacaaagaagcttggctatagctttaat
gatgaatcattattgctacaagcgcttactcatcgcagcgctaaggggcgtcataatgag
cgtctagagtttttaggagattctatattaggctttgttattgctgaggctttatttgaa
aagtttccctctcatgatgaaggcgacttaacccgtatgcgctctagtcttgttaaaggg
gttactttagctaagatagctcgtgactttaatttaggtgaatgtttaattttaggtccg
ggtgagttaaaaagcggtggtcacagacgtgaatctattttagaagatgctattgaagcc
atcataggtgctatttatttagattcagatattactaactgtaagcgattaattctcact
tggtttgaaaagcgtttaaacgtcattaaacctggcaatgaacaaaaagatccaaaaacg
agattacaagagtatttgcaaggtcgaaaaattgctttgccaagctatgaagtcatcgat
accactggccagtctcataatcagcaatttaccgtacgctgtcttaccgaagtaatggct
gatgaagtcattgccaaaggtactagccgacgtaaagcagagcaagcagcagcagagcaa
atattagccttgattgaacaagcaagtaacaagaggaaatcttaa
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