Leifsonia shinshuensis: F1C12_00240
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Entry
F1C12_00240 CDS
T06806
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
lse
Leifsonia shinshuensis
Pathway
lse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C12_00240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lse02000
]
F1C12_00240
Transporters [BR:
lse02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
F1C12_00240
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
CysA_C_terminal
AAA_22
SMC_N
AAA_28
ABC_ATPase
Rad17
AAA
AAA_30
nSTAND_NTPase5
AAA_18
AAA_25
ORC-CDC6-like
AAA_16
AAA_33
NACHT
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QNE33726
UniProt:
A0A7G6Y5G1
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All DBs
Position
47772..48833
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AA seq
353 aa
AA seq
DB search
MTVLESTVAGARVGSTVELDGVVRDFGGGAGLAGFSLAASPGEFIALLGPSGCGKTTALR
ALAGLERVDSGRVLIDGRDVTDEPTNRRDLGMVFQSYSLFPHLTSGQNVEFGLRMRKVGA
GDRRRRAAEALELVGLDHHAERYAHQLSGGQQQRVALARALVTEPRVLLLDEPLSALDAK
VRVQLREEIRRIQTELGITTFFVTHDQEEALAVADRVAVMRAGAIEQIGTPEELYHRPAT
AFVAEFVGLTNRVPATVVGGVLHVLGGTAPLASPAPDGPVTAFVRPEDLLPAADGIPADV
LTTSFLGALRRTRVRLADGSELAVQHGARDLPAPGDRIHLTLSGTPVTVAPAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcctcgaatccaccgtcgccggcgcgcgcgtcggctccaccgtcgagctggac
ggggtcgtgcgcgacttcggcggcggcgccggcctcgccgggttctcgctggccgcgagc
ccgggggagttcatcgccctgctcgggccgtccggctgcggcaagaccacggcgctgcgc
gcgctcgccgggctggagcgcgtcgactccggccgcgtgctgatcgacggccgggacgtc
acggacgagccgacgaaccggcgcgacctcgggatggtgttccagtcgtactcgctgttt
ccgcacctcacctccggccagaacgtcgagttcgggctgcggatgcgcaaggtcggcgcc
ggcgatcggcgccgtcgcgcggccgaggcgctggagctcgtcgggctcgaccaccacgcc
gagcgctacgcccaccagctctccggcggccagcagcagcgcgtggcgctcgcccgggcg
ctggtcaccgaaccgcgcgtgctcctgctggacgagcccctctccgcgctcgacgcgaag
gtgcgcgtgcagctccgcgaggagatccgccgcatccagaccgagctcgggatcacgacc
ttcttcgtgacgcacgaccaggaggaggcgctcgccgtcgccgaccgggtcgcggtgatg
cgggcgggcgccatcgaacagatcgggacgccggaggagctgtaccaccgcccggcgacc
gcgttcgtcgcggagttcgtggggctgaccaaccgcgtgcccgccacggtcgtgggcgga
gtgctgcacgtcctcggcgggaccgcgccgctcgcgtcgcccgcgcccgacggcccggtg
acggcgttcgtgcggccggaggatctgctgccggccgcggacggcatcccggccgatgtg
ctgacgaccagcttcctgggcgcgctgcggcgcacgcgggtgcgcctggccgacgggtcg
gagctggccgtccagcacggcgcgcgcgacctccccgcccccggcgaccgcatccacctc
accctctccggcacccccgtcaccgtcgcgcccgcttcctga
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