Leifsonia shinshuensis: F1C12_00595
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Entry
F1C12_00595 CDS
T06806
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
lse
Leifsonia shinshuensis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lse03000
]
F1C12_00595
Transcription factors [BR:
lse03000
]
Prokaryotic type
Helix-turn-helix
XRE family
F1C12_00595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
Peptidase_M78
MarR_2
ScfRs
HTH_25
HVO_2718
DUF5798
Motif
Other DBs
NCBI-ProteinID:
QNE33787
UniProt:
A0A7G6Y5M2
LinkDB
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Position
complement(112226..113701)
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AA seq
491 aa
AA seq
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MACMTDTAVRIDDEPTGADALTLGRRVRAFRVERAMTLEALAAAIDRAPSQVSAIENGNR
EPRLAQLRAIAAALGVTVDDLLAPDAPDERAALEIAVERAQRGPVFGALGIDPVRVSKSV
PDATLRAILALHQEVARLHKERAATPEEARRANAELRATMRARDNYFADLEAIAADLLGA
VGHTGGPVSHQTVADMADRLGFSLHYVGDLPHSTRSVTDKRNGRIYLPTEQSASRDSRSP
ILQAFASQLLGHDEPGNYADFLRQRVETNYLTAALLLPEKDAVAFLTEAKNFRRISMEDL
RDAFAVSYETACHRFTNLATARLGIPVHFMKVHESGTIIKAYENDSVSFPSDALGAIEGT
PVCRSWTARTVFDVADRFSPYYQYTDTPRGTFWCTSRIEKAKEGDYSVSVGVPFAHVKWF
RGRETTHRAVSRCPDESCCRRPSGALADRWEGMAWPAARTPTSLLAALPTGTFPGVDSTE
VYDFLERHAPA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcatgaccgacaccgctgtccggatcgacgacgagccgacgggcgccgacgcg
ctcaccctcggccggcgcgtgcgcgccttccgcgtggagcgggccatgaccctggaggct
ctggccgccgcgatcgaccgggcgccgtcgcaggtgtccgcgatcgagaacggcaaccgc
gagccgcggctcgcccagctccgcgcgatcgccgcggcgctcggcgtgacggtcgacgac
ctcctcgcccccgacgccccggacgagcgcgcggccctggagatcgcggtcgagcgggcg
cagcgcggcccggtgttcggcgcgctcgggatcgatcccgtgcgcgtctccaaatcggtc
cccgacgcgacgctgcgggcgatcctggcgctgcaccaggaggtcgcccgcctgcacaag
gagcgggcagcgacccccgaggaggcccgccgggccaacgccgagctgcgcgcgacgatg
cgcgcccgcgacaactacttcgccgacctggaggccatcgccgccgacctgctgggcgcc
gtcgggcacaccggcggcccggtctcgcaccagaccgtggcggacatggccgaccgcctc
ggcttctcgctgcactacgtcggcgacctcccgcactcgacccggtcggtgaccgacaag
cgcaacggccgcatctacctgccgacggagcagtcggcctcccgcgactcccgctccccc
atcctgcaggcgttcgcctcccagctcctcggccacgacgagccgggaaattacgcggac
tttctgcggcagcgggtggagaccaactacctgaccgcggcgctgctgctgccggagaag
gacgcggtggcattcctgacggaggccaagaacttccgccgcatctcgatggaggacctc
cgcgacgcgttcgccgtgtcgtacgagaccgcgtgccaccggttcaccaacctggcgacc
gcgcggctcggcatcccggtgcacttcatgaaggtgcacgagtcgggcaccatcatcaag
gcctacgagaacgactcggtgtcgttcccgtccgacgcgctgggcgcgatcgagggtacc
ccggtctgccggagctggacggcgcggacggtgttcgacgtcgcggaccggttcagcccc
tactaccagtacacggacaccccgcgcgggacgttctggtgcacctcccgcatcgagaag
gcgaaggagggcgactactcggtgagtgtgggcgtcccgttcgcgcacgtgaagtggttc
cgcggccgcgagaccacgcaccgcgcggtgtcgcgctgcccggacgagtcgtgctgccgc
cgcccgtcgggcgcgctggccgaccgctgggaggggatggcgtggccggcggcccgcacg
ccgacctccctgctggccgcgctccccaccggcaccttccccggcgtcgactccacggag
gtctacgacttcctcgagcgccacgcccccgcctga
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