Leifsonia shinshuensis: F1C12_00970
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Entry
F1C12_00970 CDS
T06806
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lse
Leifsonia shinshuensis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lse03016
]
F1C12_00970 (miaB)
Enzymes [BR:
lse01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
F1C12_00970 (miaB)
Transfer RNA biogenesis [BR:
lse03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
F1C12_00970 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
bPH_6
Motif
Other DBs
NCBI-ProteinID:
QNE37463
UniProt:
A0A7G6YG48
LinkDB
All DBs
Position
191993..193594
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AA seq
533 aa
AA seq
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MSVERSRVFEPSPAALAEDGRPRTYEVRTFGCQMNVHDSERLSGSLEAAGYVPADGAEAD
IVVINTCAVRENADNKLYGNLGHLAGVKRRHAGMQIAVGGCLAQKDKNVILEKAPWVDVV
FGTHNMGSLPGLLERARHNDAAEIEILESLETFPSTLPTKRDSSYSGWVSISVGCNNTCT
FCIVPSLRGKEKDRRPGDILAEIGTLVEDGAIEVTLLGQNVNSYGVEFGDRQAFSKLLRA
AGQIEGLERIRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDRILKSMRRSYRSE
KFLGILDRVRAKLPDAAISTDIIVGFPGETEEDFLDTMRVVEQARFASAFTFQYSIRPGT
PAAGMADQVPKEVVQDRYDRLIALQERISLEENERLIGREVELLVANGEGRKDADTHRLT
GRARDSRLVHFELPAGSDVPRPGDVVTVRITQAAPHYLIADSADGAPLAIRRTRAGDAWD
RAEAESCAVPSHGDAAQAAGPVSLGLPTLRPRAPLTSPGVGTMPIYDPSDGQR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atcagcgtcgagcgctcccgcgtcttcgagccgtcgccggccgccctcgcggaggacggc
cgtccgcgcacgtacgaggtgcggacgttcggctgccagatgaacgtccacgactccgag
cggctcagcggctcgctggaggcggccggctatgttccggcggacggcgccgaggcggac
atcgtcgtgatcaacacctgcgcggtccgcgagaacgccgacaacaagctctacggcaac
ctcggccacctcgccggcgtcaagcgcaggcacgccgggatgcagatcgccgtcggcggc
tgtctcgctcagaaggacaagaacgtcatcctcgagaaggcgccgtgggtcgacgtcgtc
ttcggcacccacaacatgggctcgctccctggcctcctcgaacgggcgcggcacaacgac
gccgccgagatcgagatcctggagtcgctcgagaccttcccctccacgctgccgaccaag
cgcgactcgtcctactcgggctgggtctccatctcggtcggctgcaacaacacctgcacg
ttctgcatcgtcccgtcgctgcgcggcaaggagaaggaccgccgccccggcgacatcctc
gccgagatcggcacgctggtcgaggacggcgcgatcgaggtcaccctcctcggccagaat
gtcaactcgtacggcgtcgagttcggggaccgccaggcgttcagcaagctgttgcgcgcc
gcgggtcagatcgagggcctggagcgcatccgcttcacgagcccgcacccggccgcgttc
acggacgacgtgatcgacgcgatggcggagacgccgaacgtcatgccgcagctgcacatg
ccgctccagtcgggttccgaccgcatcctcaagtcgatgcgacgctcgtaccggtcggag
aagttcctcggcatcctcgaccgcgtgcgcgcgaagctcccggacgcggcgatcagcact
gacatcatcgtcggcttccccggcgagaccgaagaggatttcctcgacacgatgcgcgtg
gtcgagcaggcccggttcgcgtcggcgttcacgttccagtactcgatccgccccggcacg
cccgcggccggcatggccgaccaggtgccgaaggaggtcgtccaggaccgttacgaccgc
ctgatcgccctgcaggagcgcatctccctggaggagaacgagcgcctgatcggccgcgag
gtggagctgctagtcgccaacggcgaaggccgcaaggacgccgacacgcaccgcctgacc
ggccgcgcccgcgacagccgcctggtccacttcgagcttcccgcgggctcggacgtcccg
cgccccggcgacgtcgtgacggtgcggatcacgcaggcggccccgcactacctgatcgcg
gacagcgccgacggcgcgcccctcgccatccgccgcacccgcgcgggcgacgcatgggac
cgcgcggaggccgagtcgtgcgcggtgccgtcccacggcgatgccgcccaggcggcaggc
ccggtctcgctcggcctgccgacgctccgcccgcgcgccccgctgacctccccgggcgtc
ggcaccatgccgatctacgacccgtcggacggccagcgctga
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