Leifsonia shinshuensis: F1C12_01065
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Entry
F1C12_01065 CDS
T06806
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
lse
Leifsonia shinshuensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
AAA_19
NAT10_TcmA_helicase
Viral_helicase1
UvrD_C_2
AAA_16
TPR_4
SLFN-g3_helicase
NPHP3_N
nSTAND3
ResIII
Radical_SAM_N
Motif
Other DBs
NCBI-ProteinID:
QNE33870
UniProt:
A0A7G6Y5V5
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All DBs
Position
210549..214070
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AA seq
1173 aa
AA seq
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MFLLDGVIVTSASDLTEASKCEFAFLRTLDVKLGRLEKTDEVEDPMYVRSSRLGDEQEHH
ILERYRERFGDGVAEIERPESLTADSLAEAVRLTADAFARASEVVFQATFFDGSFVGFAD
FIVRLPDGRYRVQDSKLARSARVTALLQLAAYAEQLRRTGVEVDETVELLLGDGSVSEHR
LSDIEPVYRKRRARLLDVIAEHVADAGPVEWGDPRFTVCGRCDTCDAEIVAARDVLLVAG
MRVTQRERLAAAGITTIDALAATTGPVEGIPDGTLAGLREQARLQLEAVEGAPPPVRVFN
APVLAVLPEPDAGDIFFDFEGDPLYTEGAGERWNLDYLFGMVDTDARFTAFWAHDFAEER
VALERFLEFVRDRRAAHPGMHIYHYAAYEQTHLLSISARHGVGEEEVDGLLRDNVMVDLY
PLVRKSVRVGSRSYSIKKLEPLYMGSELRESEVTNGADSITEYANARDLIALGRFDEAQP
LLDALGDYNRYDCVSTLRLRDWLLARAAEAGVPIGAAPMEEPEPAPEESPLRAGLLGFAG
DPLDPHRTPDREAVALAAAAIDFHRREQKSFWQSHFSRLIQPVEEWADTRDVLVVESVRV
VRDWYLDEGQRVERRELLLSGQWGAGSAVRVSESSGPFLLYEYPGPFRLLRAQPGARTVR
SAAVIDVTDDGSVLVRETLPEDVAAYPHLPMALTPAPPPNTRPLAEAVREWGTDLLAARR
DDRWPLNATVDLLRRTPPRTRSGALAPEGPEDGSGRIAAVTASLLDLDASYLAVQGPPGT
GKSYLGAHVIARLVAAHGWRVGVVAQSHAVVENLLDRVVDTGLDPALVGKVPSGAAEAPR
FTPLRRNGHLEFAAEREGRGYVLGGTAWDFANPARIPRGSLDLLVIDEAGQFSLASTIAV
GVAARNLLLLGDPQQLPQVSQGSHPEPVDGSALGWVSAGHDVLPAELGYFLAESRRMHPA
LAEAVSRLSYEGRLHAHPSARDRELGGVEPGLHPAPVEHVGDATASPQEAAEVVRIVDDL
IGRSWTDPAAHVEDVPLAQDDVIVVTPYNAQLAEVRELLDEAGFPQVRVGTVDKFQGQEA
AVAIVSLAASSAADVPRGMSFLLMKNRLNVAISRAKWAAYLVHSPELTEFLPTTPAGVGE
LSAFIRLVEPAGSGRPAPSTTVAAREAAGEARA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctcctcgacggtgtgatcgtcaccagcgccagcgatctgaccgaagcgtccaag
tgcgagttcgccttcctgcggacgctcgacgtcaagctcggccggctggagaagaccgac
gaggtcgaagatccgatgtacgtgcgctcgtcgcggctgggcgacgagcaggagcaccac
atcctggagcgttaccgcgagcggttcggcgacggcgtcgcggagatcgagcggcccgag
tcgctgaccgcggacagcctcgcggaggccgtgcgcctcactgccgacgccttcgcgcgc
gcgagcgaagtggtcttccaggccaccttcttcgacgggtcgttcgtcggtttcgcggac
ttcatcgtgcggctgcccgacggtcgctaccgtgtgcaggactccaagctggcccgcagc
gcccgggtcaccgcgctgctgcagctcgcggcgtacgccgagcagctgcggcgcaccggc
gttgaggtcgacgagacggtcgagctgctgctcggcgacggctcggtcagcgagcaccgg
ctgtccgacatcgagccggtctaccgcaagcgccgcgctcggctgctcgacgtcatcgcc
gagcacgtcgcggacgcggggccggtggagtggggcgacccgcggttcacggtctgcggc
cgctgcgacacctgcgacgcggagatcgtcgccgcccgcgacgtcctcctggtcgccggc
atgcgcgtcacgcagcgcgagcgcctggcggcggcgggcatcacgaccatcgacgcgctc
gccgccacgaccgggccggtcgagggcatccccgacggcacgctcgccgggctgcgcgag
caggcgaggctgcagctggaggccgtcgagggcgcgccgccgcccgtgcgggtcttcaac
gctccggtgctcgccgtccttccggagcccgacgcgggcgacatcttcttcgacttcgag
ggcgacccgctctacacggagggcgcaggcgagcgctggaacctcgactacctgttcggc
atggtcgacaccgacgcccggttcaccgcgttctgggcgcacgacttcgccgaggagcgg
gtggcgctggagcgcttcctggagttcgtccgcgatcgccgcgccgcccatcccggcatg
cacatctaccactacgcggcgtacgagcagacgcacctgctctcgatctccgcccggcac
ggcgtcggcgaggaggaggtcgacggcctgctgcgcgacaacgtgatggtcgacctgtac
ccgctggtgcgcaagtccgtccgggtcggctcgcggtcgtactccatcaagaagctggag
ccgctgtacatggggtccgagctgcgcgagagcgaggtgacgaacggcgccgactccatc
accgagtacgcgaacgcccgcgacctgatcgcgctcgggcgcttcgacgaggcccagccg
ctgctcgacgcgctcggagactacaaccgctacgactgcgtctcgacgctccgcctccgg
gactggctgctcgcccgcgccgccgaagcgggcgtcccgatcggcgccgccccgatggag
gagccggagccggccccggaggagtccccgctgcgcgcgggcctgctcgggttcgccggg
gacccgctcgatccgcaccgcacgcccgaccgggaggccgtggcgctcgccgcggcggcg
atcgacttccaccggcgcgagcagaagagtttctggcagagccacttctcccggctcatc
cagccggtggaggagtgggccgacacccgcgacgtgctggtcgtggagtccgtgcgcgtg
gtgcgcgactggtacctcgacgaaggtcagcgggtggagcgccgcgaactgctgctgtcc
ggccagtggggcgctggcagtgcggtgcgggtgagcgagagctcggggccgttcctgctc
tacgagtacccggggccgttccggctgctgcgtgcccagccgggcgcgcggaccgtgcgc
agcgccgccgtcatcgacgtcaccgacgacggctcggtgctggtgcgcgagacgctgccg
gaggacgtggcggcctacccgcacctcccgatggcgctcaccccggcgccgccgccgaac
acgcgcccgctcgccgaggcggtgcgggagtggggcaccgacctgctggccgcgcgccgg
gacgaccgctggcccctgaacgctaccgtcgacctgctccggcgcacgccgccgcgcacg
cgatccggagcgctggcgcccgaggggccggaggacggcagcggccgcatcgccgcggtc
accgcgagcctgctcgacctggacgcctcctacctggcggtgcaggggcctcccggcacc
ggcaagtcctacctcggcgcccacgtcatcgcccggctcgtcgccgcgcacggctggcgc
gtcggggtggtcgcccagtcgcacgccgtggtcgagaacctgctcgaccgggtcgtggac
accgggctcgacccggccctggtcggcaaggtgccgagcggcgcggccgaagcgccgcgg
ttcacgccgctgcgccgcaacggccacctggagttcgccgccgagcgcgagggccgcggc
tacgtgctcggcggaacggcgtgggacttcgccaaccccgcgcgcatcccgcgcggcagc
ctcgacctcctggtgatcgacgaggccgggcagttctcgctcgcgtcgaccatcgcggtc
ggcgtggccgcgcggaacctgctgctgctcggcgacccgcagcagctcccgcaggtgagc
cagggcagccatcccgagcccgtcgacggctccgcgctcggctgggtgagcgccggccac
gacgtgctcccggccgagctcggctacttcctcgctgagagccgccggatgcatccggcg
ctggcggaggccgtgtcccggctgtcgtacgagggccggctgcacgcgcacccgagcgca
cgcgaccgcgagctcggcggcgtcgagcccggcctccacccggcaccggtggagcacgtg
ggcgacgcgaccgcgtcgccgcaggaagccgcggaggtcgtccgcatcgtggacgacctg
atcggccgctcctggaccgaccccgcagcgcacgttgaggacgttccgctggcgcaggac
gacgtcatcgtcgtgaccccgtacaacgcgcagctggccgaggtgcgcgagctgctggac
gaggccggcttcccgcaggtgcgggtcgggacggtcgacaagttccagggccaggaggcc
gccgtcgcgatcgtcagcctcgccgcgtcgtcggccgccgacgtgccgcgcgggatgtcg
ttcctgctgatgaagaaccggctgaacgtcgcgatctcgcgggcgaagtgggcggcgtac
ctggtgcactcgcccgagctgaccgagttcctgccgacgaccccggccggcgtgggcgag
ctcagcgcgttcatccggctggtcgagcccgccggctcgggccgccccgcgccgtccacc
accgtggctgcgcgggaagccgctggtgaggcgcgggcctga
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