Leifsonia shinshuensis: F1C12_01130
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Entry
F1C12_01130 CDS
T06806
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lse
Leifsonia shinshuensis
Pathway
lse03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
F1C12_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_01130
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
F1C12_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5321
Motif
Other DBs
NCBI-ProteinID:
QNE33882
UniProt:
A0A7G6Y5W7
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All DBs
Position
226284..227186
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AA seq
300 aa
AA seq
DB search
MRAIWTGAITFGLVNVPVKVYSATEDHDVALHQVHDADGGRIRYKRVCEIDGKTIPYEHI
AKAYDDGERTVILTPEDLESLPAERSREIDVVEFVPNDQLDPLMFDRSYYLEPDSKSLKA
YALLRKTLEDEDRTAIVNFALRQKTRLGALRVRGNVLVLQTMLWHDEIRAADFPSLETAP
RITERELSLSSALMESFAGDFEPEKFSDEYQDELRKLIDAKLEQGESIDTAATFGEEQEE
AKKGGGEVIDLMEALQRSVERSRGGGSKDAAEKKPAATAKKAPEKKAQAKKAPAKAKKPA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagggccatatggacgggagccatcaccttcgggctggtcaatgtgccggtgaaggtc
tacagcgcgaccgaggaccacgacgtggcgctgcaccaggtgcacgacgccgacggcggg
cgcatccggtacaagcgcgtgtgcgagatcgacggcaagacgatcccgtacgagcacatc
gcgaaggcgtacgacgacggcgagcggacggtcatcctgacgccggaggacctggagtcg
ctgcccgccgagcgcagccgggagatcgacgtggtcgagttcgtgccgaacgaccagctc
gacccgctcatgttcgaccgcagctactacctggagccggactcgaagtcgctgaaggcc
tacgcgctgctgcgcaagacgctggaggacgaggaccgcaccgcgatcgtcaacttcgcg
ctgcgccagaagacccggctgggcgcgctgcgggtgcgcggcaacgtcctggtgctgcag
accatgctgtggcacgacgagatccgcgcggccgacttcccgtcgctggagaccgcgccg
cgcatcaccgagcgcgagctgtcgctgtcctccgccctgatggagagcttcgccggcgac
ttcgagccggagaagttcagcgacgagtaccaggacgagctgcgcaagctgatcgacgcc
aagctggagcagggcgagagcatcgacaccgcggcgaccttcggcgaggagcaggaggag
gccaagaagggcggcggcgaggtcatcgacctgatggaggcgctgcagcgcagcgtcgag
cgcagcaggggaggcgggtcgaaggacgccgcggagaagaagccggcggcgacggcgaag
aaggctccggagaagaaggcccaggcgaagaaggctcccgcgaaggccaagaaacccgcg
tga
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