Leifsonia shinshuensis: F1C12_01135
Help
Entry
F1C12_01135 CDS
T06806
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lse
Leifsonia shinshuensis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lse03032
]
F1C12_01135
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_01135
Enzymes [BR:
lse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1C12_01135
DNA replication proteins [BR:
lse03032
]
Prokaryotic type
DNA Topoisomerases
F1C12_01135
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1C12_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QNE33883
UniProt:
A0A7G6Y5W8
LinkDB
All DBs
Position
227183..228148
Genome browser
AA seq
321 aa
AA seq
DB search
MTRLRRSDPSGPGYARRGSAKGPVYEDEAGNRIVDERELERIRSLVIPPAWKDVWISPDA
RGHIQAVGTDAAGRRQYLYHEAWRLHQDRIKFERAAQLAETLPGARRKVTMDLRQEGFGR
DRILAAAFRVIDLGSLRIGSEEYLHANGSRGLTTLLCRHAAIDGDQVTLTFPAKSAQKWS
STIEDPDLAELLAEIVALRGQRSRLLSWKDGTWHTIRPASLNEYIQRQTGGEFTAKDFRT
LHGTIVAAKALAELGLADKEAQRAKRVTAAVAEAADALGNTPTIARNSYIDPRVFDRYRS
GDVIDTGGGRAPEPALLELLG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgcctgcgccgcagcgacccgtcggggccgggctatgcgcgccgcggctccgcg
aagggtccggtgtacgaggacgaagcgggcaaccgcatcgtggacgagcgcgagctggag
cgcatccgctcgctcgtcatcccgcccgcgtggaaggacgtctggatctccccggacgcc
cgcggccacatccaggcggtcgggacggacgcggccggacggcggcagtacctctaccac
gaggcctggcggctgcatcaggaccggatcaagttcgagcgggcggcgcagctcgccgag
acgctgccgggcgctcgccgcaaggtcacgatggacctgcggcaggagggcttcgggcgc
gaccgcatcctcgccgccgcgttccgcgtcatcgacctcggcagcctccggatcggcagc
gaggagtacctgcacgcgaacggcagccgcggcctcaccacgctgctctgccgccacgcc
gccatcgacggcgaccaggtgacgctgacgttccccgccaagtcggcgcagaagtggtcg
agcaccatcgaggaccccgacctggcggagctgctggccgagatcgtggcgctgcgcggt
cagcgttcccggctgctgtcgtggaaggacgggacctggcacacgatccgcccggcgtcg
ctgaacgagtacatccagcgccagaccggaggcgagttcacggccaaggacttccgcacc
ctgcacggcacgatcgtcgcggcgaaggcgctcgccgaactgggcctggcggacaaggag
gcccagcgggcgaagcgggtcacggcagcggtggcggaggccgcggacgcgctcgggaac
acgccgacgatcgccaggaacagctacatcgacccgcgggttttcgaccgctaccggtcg
ggcgacgtcatcgacacgggcggtggccgggctcccgagccggcgctgctggagctcctg
ggctga
DBGET
integrated database retrieval system
