Leifsonia shinshuensis: F1C12_01790
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Entry
F1C12_01790 CDS
T06806
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lse
Leifsonia shinshuensis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lse03032
]
F1C12_01790
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_01790
Enzymes [BR:
lse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F1C12_01790
DNA replication proteins [BR:
lse03032
]
Prokaryotic type
DNA Topoisomerases
F1C12_01790
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1C12_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Cas9-BH
Inp1
Motif
Other DBs
NCBI-ProteinID:
QNE33999
UniProt:
A0A7G6Y684
LinkDB
All DBs
Position
complement(363724..366198)
Genome browser
AA seq
824 aa
AA seq
DB search
MTPADDQAPTTERIEDVDVTTEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILYMMTE
MGLRPDRGHVKSARVTGEVMGKLHPHGDSAIYDALVRMAQDFTLRVPLVDGHGNFGSLDD
GPAAARYTEARLAAAALALTEDLDEDVVDFVPNYDNQLLQPDVLPAAFPNLLVNGASGIA
VGMATNMAPHNLVEVVGAARHLLANPEATLDELMDYVPGPDLPSGGTIAGLSGVRDAYAT
GRGSFKMRAKVRVESITARKSGLVVTELPYGVGPERVIEKIKDGVNAKKLNGISDVTDLS
DRQHGLRLVIGIKTGFSPDAVLEQLYRHTPLEEGFSINNVALVAGGPQTLGLRELLRVYL
DHRVSVVTRRSEFRLARRKERLHLVEGLLIAILDIDEVIQVIRTSDDTDQARTRLQQVFD
LSTLQADYILELRLRRLTKFSRIELETERDQLAAEIAELEEILGSKARIEGLVSDELEQV
AVKFGTPRRTLLTEAKPSIAGAGSRSKAMTVQLEVADVPCRVYLSTTGRILRVDAGVGEG
EGLDRIQPPARRSKHDAILSRLDTTSRSEIGAVTDRGRLIRFSPVDLPAAPLNSVQLGAG
VKVGDYLALADRKERVLAIVSLDSPRAIALGTRQGVVKRVTPGDWANKPEFEVITLKAGD
AVVGAVQSADDAELVFVSSDSQLLRFSAGSVRPQGRAAGGMAGINLAADARVVFFGAVEA
AEREEAVVVTIAISDQTLPGADPGSGKVSDFAEFPAKGRATGGVRSQRFLKGETELALAW
VGAAPALAVGSDGAQRVLPEGGARRDGSGTPLDMVVASIGSRLA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacaccagcagacgatcaggcccctacgacggaacgcatcgaagacgtcgacgtcacg
accgagatgcagggctcgttcctggagtacgcatactccgtcatctactcccgggcgctc
cccgacgcccgcgacggcctgaagccggtgcagcggcgcatcctctacatgatgaccgag
atgggcctgcgcccggaccgcggtcacgtgaagtcggcgcgcgtcaccggcgaggtgatg
ggaaagctgcacccgcacggcgacagcgccatctacgacgcgctcgtgcggatggcccag
gacttcaccctccgcgtaccgctggtcgacggccacggcaacttcggctcgctggacgac
ggccccgcggccgcccggtacacggaggcgcgcctcgccgccgccgcgctggccctcacc
gaggacctggacgaggacgtcgtcgacttcgtccccaactacgacaaccagctcctgcag
cctgacgtgctgcccgccgcgttcccgaacctcctggtcaacggcgccagcggcatcgcg
gtcggcatggccacgaacatggcgccgcacaacctggtggaggtcgtcggcgccgcccgc
cacctcctggccaacccggaggccacgctcgacgagctgatggactacgtgccgggcccc
gacctcccgagcggcggcaccatcgccggcctctccggcgtgcgcgacgcgtacgcgacc
ggccgcggcagcttcaagatgcgcgccaaggtgcgcgtcgagtccatcaccgcgcgcaag
agcggccttgtggtcaccgagctgccctacggcgtcggcccggagcgcgtgatcgagaag
atcaaggacggcgtcaacgccaagaagctgaacggcatctcggacgtcaccgacctgtcc
gaccgccagcacggcctccgactcgtcatcggcatcaagaccgggttcagcccggacgcc
gtcctcgagcagctctaccggcacacaccgctggaggagggcttctcgatcaacaacgtc
gccctcgtcgccggtggcccgcagaccctcgggctgcgcgagctgctgcgcgtctacctc
gaccaccgcgtgagcgtggtgacgcggcgctcggagttccgcctcgcccgccgcaaggag
cgcctgcacctcgtcgagggcctgctcatcgcgatcctcgacatcgacgaggtcatccag
gtcatccgcacctccgacgacaccgaccaggcgcgcacgcggctgcagcaggtgttcgac
ctcagcacgctgcaggccgactacatcctggagctgcggttgcgccggctcaccaagttc
tcccgcatcgagctggagaccgagcgcgaccagctggcggccgagatcgccgagctggag
gagatcctcggcagcaaggcgcggatcgagggcctggtctccgacgagctggagcaggtc
gccgtgaagttcggcaccccgcgccgcacgctgctcaccgaggccaagccgtccatcgcc
ggcgccggctcgcgcagcaaggcgatgacggtgcagctggaggtcgcggacgtcccgtgc
cgggtgtacctctcgaccaccggccgcatcctgcgcgtcgatgcgggcgtcggcgagggc
gaaggactcgaccgcatccagccgccggcccggcgcagcaagcacgacgccatcctgtcg
cggctggacaccacgagccgcagcgagatcggcgcggtcaccgaccgcggccggctgatc
cggttctcgccggtcgacctcccggccgccccgctcaactcggtgcagctcggcgcgggc
gtgaaggtgggcgactacctcgcgctcgccgaccgcaaggagcgggtgctcgcgatcgtc
tcgctggactccccgcgcgcgatcgccctcggcacccgccagggcgtggtcaagcgggtc
acgccgggcgactgggcgaacaagccggagttcgaggtcatcaccctgaaggccggtgac
gccgtcgtcggagctgtgcagtcggccgacgacgccgagctcgtcttcgtctccagcgac
tcccagctgctgcggttctccgccggctcggtgcgtccgcagggccgcgcggccggcggc
atggccggcatcaacctggccgccgacgcccgcgtggtgttcttcggcgcggtggaggcc
gcggagcgcgaggaggcggtcgtcgtgaccatcgcgatcagcgaccagaccctccccgga
gccgaccccggcagcggcaaggtgagcgacttcgccgagttcccggccaagggccgcgcg
accggcggcgtccgctcgcagcgcttcctcaagggcgagaccgagctggcgctcgcctgg
gtcggcgcagcgcccgccctggcggtcggctccgacggcgcccagcgcgtcctccccgag
ggcggcgcccgccgcgacggctccggcacccccctcgacatggtcgtcgcctccatcggc
tcccgtctcgcctga
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