Leifsonia shinshuensis: F1C12_01880
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Entry
F1C12_01880 CDS
T06806
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
Organism
lse
Leifsonia shinshuensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
tRNA_synthFbeta
Ilm1
Motif
Other DBs
NCBI-ProteinID:
QNE34013
UniProt:
A0A7G6Y698
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Position
complement(388112..390271)
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AA seq
719 aa
AA seq
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MTDYSTIDFSPLVELTSDEVVTHSLVKDVRLPSGKTLALVTLDNGRDHTRPNTMGPATLL
ELGRTFDALTERAARGEIDAVAVTGKPFILAAGADLSRVSDIPSVEVAKLLPQLGHYVLG
KQATFGVPSFVFTNGLALGGGVEIGLNADYRTIDRNAAAFALPEVFLGLIPGWGGATILP
NLIGIENALKVVVENPLKQNRMLKPQEVFELGIADAIFDSANFLEDSLLWADKVLTGAVE
VKRPNVPGKVERMVKWDAAIGIARKMLESRIGTVPKSPYKALDLLKAAKSNDRAAGFELE
DDALAELISGDQFQASIYAFNLVQKRAKRPAGAPDKALAKKVTKIGVIGAGYMASQFALL
FVRRLRVPVVITDLDQAHVDKGVAYIHDEIGKLQEKGRISPDEANRLRALVTGTTDKADF
ADCDWVIEAVFEELTVKQNVFAEVEQYLSDEAVLATNTSSLSVEQIGAKLKHPERLVGFH
FFTPVAVMPLIEVVKTPHTDDSTLSTAMVTAAALKKNAVITADTPGFVVNRVLAKILGEA
MHAVDDGTPFDTVDKAFAPLGLPMAPSVLLDLVGLKVGAHVLDTHHAAFPDRFYRSENLH
RLAEHGTLLEKDSKGKVKGLDKGAAKILAGGKNPWSEQEILRRLEDGLADEIHRMLVDDH
VVEAPEDIDLCMILGAGFPFQMGGITPYLDRVGASERVFGDTFQHPPVRGVRTPEKAVV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgactacagcaccatcgacttctccccgctcgtcgagctcacctccgacgaggtc
gtcacccactccctcgtgaaggacgtccggctgcccagcggcaagacgctcgcgctggtc
acgctcgacaacggccgcgaccacacccgcccgaacacgatgggccccgccacgctcctg
gagctgggccggacgttcgacgccctgaccgagcgcgcggcgcgcggcgagatcgacgcg
gtcgccgtcaccggcaagccgttcatcctcgccgccggcgccgacctcagccgcgtcagc
gacatcccgagcgtggaggtcgccaagctgctcccccagctcggccactatgtgctcggc
aagcaggcgaccttcggcgtcccgtcgttcgtgttcacgaacggcctcgcactcggcggc
ggcgtggagatcggcctcaacgccgactaccgcaccatcgaccgcaacgcggcggcgttc
gcgctgcccgaggtgttcctcggcctcatccccggctggggcggcgcgaccatcctgccg
aacctgatcggcatcgagaacgcgctcaaggtcgtcgtcgagaacccgctcaagcagaac
cggatgctgaagccccaggaggtcttcgagctcgggatcgcggacgcgatcttcgactcg
gccaacttcctcgaggactcgctgctctgggccgacaaggtcctgaccggcgccgtcgag
gtcaagcgcccgaacgtgccgggcaaggtcgagcgcatggtcaagtgggacgccgccatc
ggcatcgcccgcaagatgctggagagccgcatcggcaccgtcccgaagtcgccgtacaag
gccctcgacctgctgaaggccgccaagtcgaacgaccgcgccgccggcttcgagctggag
gacgacgcgctcgccgagctcatctccggcgaccagttccaggccagcatctatgccttc
aacctggtccagaagcgcgccaagcggcccgcgggagccccggacaaggcgctggcgaag
aaggtcaccaagatcggcgtgatcggcgccggctacatggccagccagttcgcgctgctg
ttcgtccggcgcctgcgggtgcccgtggtgatcacggacctcgaccaggcccacgtcgac
aagggcgtggcgtacatccacgacgagatcgggaagctccaggagaagggccggatctcg
cccgacgaggcgaaccgcctgcgtgccctggtgaccggcacgaccgacaaggccgacttc
gccgactgcgactgggtcatcgaggccgtcttcgaggaactgaccgtcaagcagaacgtc
ttcgcggaggtcgagcagtacctctccgacgaggccgtgctggcgaccaacacctcctca
ctctcggtggagcagatcggcgcgaagctgaagcaccccgagcgcctggtcggcttccac
ttcttcaccccggtcgcggtcatgccgctgatcgaggtcgtgaagacgccgcacacggac
gactccacgctctccacggcgatggtcacggcggcggcgctgaagaagaacgccgtcatc
accgccgacacccccggcttcgtggtgaaccgggtgctggcgaagatcctcggtgaggcc
atgcacgcggtggacgacggcacgccgttcgacaccgtggacaaggcgttcgcgccgctc
ggcctgccgatggcgccctccgtgctgctcgacctggtcggcctgaaggtcggcgcgcat
gtgctcgacactcaccacgcggccttccccgaccggttctaccgcagcgagaacctgcac
cgcctggcggagcacggcacgctgctggagaaggactccaagggcaaggtgaagggcctc
gacaagggcgcggccaagatcctggccggcggcaagaacccgtggagcgagcaggagatc
ctgcgacggctcgaggacggcctggccgacgagatccaccgcatgctcgtggacgaccac
gtggtcgaggctccggaggacatcgacctctgcatgatcctcggcgcgggcttcccgttc
cagatgggcggcatcacgccgtacctcgaccgggtgggcgcgtccgagcgggtcttcgga
gacaccttccagcacccgccggtgcgcggcgtccgcactcccgagaaggccgtcgtctga
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