Leifsonia shinshuensis: F1C12_02555
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Entry
F1C12_02555 CDS
T06806
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse03030
DNA replication
lse03410
Base excision repair
lse03420
Nucleotide excision repair
lse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F1C12_02555 (polA)
03410 Base excision repair
F1C12_02555 (polA)
03420 Nucleotide excision repair
F1C12_02555 (polA)
03440 Homologous recombination
F1C12_02555 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lse03032
]
F1C12_02555 (polA)
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_02555 (polA)
Enzymes [BR:
lse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F1C12_02555 (polA)
DNA replication proteins [BR:
lse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F1C12_02555 (polA)
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F1C12_02555 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1C12_02555 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Peptidase_MA_2
Motif
Other DBs
NCBI-ProteinID:
QNE34122
UniProt:
A0A7G6Y6K7
LinkDB
All DBs
Position
520013..522688
Genome browser
AA seq
891 aa
AA seq
DB search
MSDSEKPTLLIIDGHSLAFRAFYALPVDSFVNREGQHTNGIHGFIAMLINLLQQQRPTHL
AVAFDISRYSFRTREYPEYKGTRNETPSEFVGQIPLLQEALHAMNITTIAKEDFEADDIL
ATLARQGREQGYRVLLVSGDRDTIQLVNDDVTLLYPNVRGVSELKVYDPAAVRERYGVEP
HQYPEIAALVGETSDNLIGIDKVGEKTAVKWVQQYGTVENIVAHADEIKGVVGQNLRDQQ
ENALRNRRLNRLLDDVELEVAPADLERKPLNENAVRDIFARLQFKTLLDRLMKAASEDGT
LAGAGGTAPSEGDAGAVSAPLVRTLVDEELANWLQKASADGTAVAVQLETGPAGITGFGL
AAADDTVYVPWAAGRPDYTALEEWLASSAPKYFFHAKPQFKALSRAGFVVDGLAFDTRIA
SWLVRPGAAPQSLAEQVYEVLGETLPVSDPNQLVPLNDAVSPATEAWYIRRVAEGQMIAL
DAGTRAVLDDIELPLVAVLAEMELDGVSIDTEVLRRLRGQLTDKANDYAARAYAEVGHEL
NLGSPKQLQQVLFEELGMPKTRSTKTGYSTDAQSLADLQESNPHPFLDLLLQHRDATKLK
QIVETLERSITVDDRIHTTYDQTGTSTGRISSNDPNLQNIPIRTEEGREIRSAFRSAPEY
ETLLTADYSQIEMRIMAHLSEDPGLIEAFNAGEDLHRFVGARVFGVAPEDVTPLMRTKVK
AMSYGLAYGLSPFGLSKQLRIETKEARDLMAGYFERFGAVRDYLRSVVEIARVDGYTETI
FGRRRPFADLTSTNRVLRENAERQALNAPIQGSAADIMKIAMLGIAGDLIDQQLNSRMLL
QVHDELIFEVAPGEWDALESVVRTRMAGAADLRVPLDVQIGRGPNWEAAAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagactccgaaaagcctacccttctgatcatcgacggccattcgctggcattccgg
gccttctacgccctccccgtcgacagtttcgtgaaccgcgagggtcagcacaccaacggc
atccacggcttcatcgcgatgctgatcaacctgctccagcagcagcgcccgacccacctc
gcggtcgccttcgacatctcccgctactcgttccgcacccgcgagtacccggagtacaag
ggcacccgcaacgagaccccctccgagttcgtggggcagatcccgctgctgcaggaggcc
ctgcacgcgatgaacatcaccaccatcgccaaggaggacttcgaggccgacgacatcctc
gccaccctcgcccgccagggcagggagcagggctaccgcgtcctcctcgtctccggcgac
cgcgacaccatccagctcgtcaacgacgacgtcacgctgctctacccgaacgtgcgcggc
gtctccgagctcaaggtctacgaccccgccgccgtgcgcgagcgctacggcgtcgagccc
caccagtacccggagatcgcggcgctcgtcggcgagaccagcgacaacctgatcggcatc
gacaaggtcggcgagaagaccgcggtcaagtgggtgcagcagtacggcaccgtcgagaac
atcgtcgcccacgccgacgagatcaagggcgtcgtcgggcagaacctgcgcgaccagcag
gagaacgccctccgcaaccgccggctcaacaggctgctggacgacgtcgagctggaggtc
gcgcccgccgacctggagcgcaagccgctcaacgagaacgcggtgcgcgacatcttcgcc
cgcctccagttcaagaccctgctcgaccggctgatgaaggccgcctctgaagacggcacc
ctcgccggcgcgggcggcaccgcgccctccgaaggcgacgccggcgcggtcagcgccccg
ctggtccgcacgctcgtggacgaggagctcgccaactggctgcagaaggcctccgccgac
ggcacggcggtcgccgtccagctggagaccggccccgccggcatcaccggcttcggcctg
gccgccgccgatgacacggtctacgtcccgtgggccgccggccgtcccgactacaccgcg
ctggaggagtggctcgcgagcagcgcgcccaagtacttcttccacgccaaaccgcagttc
aaggcgctgagccgcgccggcttcgtggtcgacggcctcgcgttcgacacccgcatcgcc
tcctggctggtccggccgggcgccgccccgcagtcgctggccgagcaggtctacgaggtg
ctgggcgagaccctgccggtctccgaccccaaccagctcgtgccgctgaacgacgcggtc
agcccggcaaccgaggcctggtacatccgccgcgtcgccgagggccagatgatcgccctc
gacgccggcacccgtgcggtgctcgacgacatcgagctgccgctggtcgcagtgctcgcc
gagatggagctcgacggcgtctcgatcgacaccgaggtgctgcgccgcctgcgcggccag
ctcaccgacaaggccaacgactacgccgcccgcgcctacgcggaggtcggccacgagctc
aacctcggctcgcccaagcagctccagcaggtgctgttcgaggagctcgggatgccgaag
acccgctccaccaagaccggctactccaccgacgcccagtcgctggccgacctccaggag
agcaacccgcacccgttcctcgacctgctgctgcagcaccgcgacgcgaccaagctgaag
cagatcgtggagacgctggagcgctcgatcaccgtggacgaccgcatccacaccacgtac
gaccagaccggcaccagcacgggccggatctcgtccaacgaccccaacctccagaacatc
ccgatccgcaccgaggagggccgcgagatccgctcggcgttccgcagcgcgcccgagtac
gagacgctgctgaccgccgactactcgcagatcgagatgcgcatcatggcgcacctctcc
gaggacccgggactgatcgaggcgttcaacgcgggggaggacctgcaccgcttcgtcggc
gcgcgcgtcttcggcgtcgctccggaggacgtcaccccgctcatgcgcacgaaggtcaag
gcgatgtcgtacggcctcgcctacggcctcagcccgttcggcctgtccaagcagctccgc
atcgagacgaaggaggcgcgcgacctgatggccggctacttcgagcgcttcggcgcggtg
cgcgactacctgcgcagcgtcgtggagatcgcccgggtcgacggctacaccgagacgatc
ttcggccgccgccgcccgttcgccgacctgacctccaccaaccgggtgctgcgcgagaac
gccgagcggcaggcgctcaacgcgcccatccagggctcggccgccgacatcatgaagatc
gccatgctcggcatcgcgggcgacctgatcgaccagcagctgaactcgcggatgctcctg
caggtgcacgacgagctcatcttcgaggtcgcgcccggcgagtgggacgccctagagtcg
gtcgtccgcacccggatggccggcgccgccgacctccgcgtgccgctcgacgtgcagatc
ggccgcgggccgaactgggaggccgccgcgcactga
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