KEGG   Leifsonia shinshuensis: F1C12_02790
Entry
F1C12_02790       CDS       T06806                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lse  Leifsonia shinshuensis
Pathway
lse03030  DNA replication
lse03430  Mismatch repair
lse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F1C12_02790
   03430 Mismatch repair
    F1C12_02790
   03440 Homologous recombination
    F1C12_02790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lse03032]
    F1C12_02790
   03400 DNA repair and recombination proteins [BR:lse03400]
    F1C12_02790
Enzymes [BR:lse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F1C12_02790
DNA replication proteins [BR:lse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     F1C12_02790
DNA repair and recombination proteins [BR:lse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     F1C12_02790
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QNE34164
UniProt: A0A7G6Y6P9
LinkDB
Position
complement(571009..571707)
AA seq 232 aa
MSNWHHELGVFDLETTGVDVESARIVTAHVGLLGENGEVRHGRYWLLDPEVEIPAEATAV
HGITTELAREKGMDAGAGVDAIVDQLRRLFDRGIPVVAYNAPYDFTLLDREARRHGVEPL
HSPGPIIDPLVIDRAVDRYRPGKRTLTVTATHYGVELIAAHDAGADAIAAGRLAQALAQR
HAEELAMGALELHTKQVDWCREQAADFQEYMRRARDPEFTASGAWPVHAWPA
NT seq 699 nt   +upstreamnt  +downstreamnt
atgagcaactggcatcacgaactcggcgtcttcgatctggagaccacgggcgtggatgtc
gaatcggcgcggatcgtcaccgcccacgtcgggctgctcggcgagaacggcgaggtgcgg
cacggccggtactggctgctcgaccccgaggtggagatccccgccgaggccaccgccgtc
cacggcatcacgaccgagctcgcccgcgagaaaggcatggacgccggggccggcgtcgac
gcgatcgtcgaccagctccgtcgcctgttcgaccgcggcatccccgtggtcgcctacaac
gcgccgtacgacttcacgctgctcgaccgggaggcgcgccgccacggcgtcgagccgctg
cactcccccggcccgatcatcgacccgctcgtgatcgaccgcgcggtggaccgctaccgc
cccggcaagcgcacgctcacggtcaccgcgacgcactacggcgtcgagctgatcgccgca
cacgacgccggcgcggacgccattgccgcgggccggctggcgcaggcgctcgcccagcgt
cacgccgaagagctcgccatgggcgccctggagctgcacaccaagcaggtggactggtgc
cgcgaacaggcggccgacttccaggagtacatgcgtcgcgcccgggacccggagttcacg
gcgtccggcgcctggccggtgcacgcctggcccgcctga

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