Leifsonia shinshuensis: F1C12_04425
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Entry
F1C12_04425 CDS
T06806
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse00061
Fatty acid biosynthesis
lse00071
Fatty acid degradation
lse01100
Metabolic pathways
lse01212
Fatty acid metabolism
lse02024
Quorum sensing
lse04146
Peroxisome
Module
lse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F1C12_04425
00071 Fatty acid degradation
F1C12_04425
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F1C12_04425
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C12_04425
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lse01004
]
F1C12_04425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lse04147
]
F1C12_04425
Enzymes [BR:
lse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F1C12_04425
Lipid biosynthesis proteins [BR:
lse01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F1C12_04425
Exosome [BR:
lse04147
]
Exosomal proteins
Exosomal proteins of breast milk
F1C12_04425
Exosomal proteins of breast cancer cells
F1C12_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QNE34450
UniProt:
A0A7G6Y7I5
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All DBs
Position
912324..914084
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AA seq
586 aa
AA seq
DB search
MSRSRRPCTRRPRPNRLVSVSGYSDRPWVSAYAPDVPADIELPEGSLAHLIDGSVATYGK
HVALEFFGATTTYAELGDQIARAAEGLRKRGVRKGDRVALVLPNCPQHVVAFYAALRLGA
VVVEHNPLYTPRELRHQFEDHGATVAIVWDKVVPMVQDLPADLGVSTVIAVDITRGMPAT
KRFALRLPVPAARKAREQLTAKVSGAVTWESLVSSRRLKASVPRPERDDLALIQYTSGTT
GRPKGVMLSHLNLAVNAAQARAWVPTIERGASVVYAVLPLFHAYGLTLCLTFAMSMGARL
VLFPKFDPDLVLDVVKKRPATFLPAVPPIYERLVQAAEKRKVSLSGIDIAISGAMSLPQS
IVDLWESKTGGYLVEGYGLSECSPVLMANPVGATRKAGTVGLPLPGTELRVADPEDPSVD
RAFGEEGELLARGPQVFSGYWRNADESAKVLTADGWFRTGDIVTMDEDGFVRIVDRIKEL
IVTGGFNVSPTEVEDALRSFEGVADVAVVGLPHRRGGEDVVAAVVMEPGASFDEAAIRAY
GRDCLTAYKVPKHVVQVDELPRSIVGKVIRRKVRDQLVAQQEAAGA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgatcgaggaggccgtgcacgcggcgaccacggcccaataggctcgtgtccgtg
agtggttacagcgatcgcccctgggtctccgcctacgcgccggacgtccccgccgacatc
gagctgccggagggctcccttgcccacctgatcgacggctcggtcgcgacctacggcaag
cacgtcgccctggagttcttcggtgcgacgacgacctacgcggagctcggcgaccagatc
gcgcgcgccgcggagggtctgcgcaagcgcggcgtccgcaagggcgaccgggtcgcgctc
gtgctgccgaactgcccgcagcacgtcgtcgcgttctacgcagcgttgcggctgggcgcg
gtcgtggtggagcacaacccgctctacacgccgcgcgagctgcgccaccagttcgaggac
cacggcgcgaccgtggcgatcgtctgggacaaggtcgtgccgatggtgcaggacctgccg
gccgacctcggcgtctcgacggtcatcgcggtcgacatcacgcgcgggatgcccgcgacc
aagcgcttcgcgctgcgtctgccggtccccgccgcccgcaaagcgcgcgagcagctgacc
gcgaaggtgtccggcgccgtcacgtgggagtcgctggtgtcctcccgccggctgaaggcc
tccgtgccgcggccggaacgcgacgacctcgcgctcatccagtacacgagcgggaccacg
gggcggccgaaaggcgtcatgctcagccacctcaacctcgcggtcaacgcggcgcaagcg
cgcgcgtgggttcccacgatcgagcgcggcgcgtccgtggtgtacgcggtcctgccgctg
ttccacgcctacggcctcacgctctgcctgaccttcgcgatgagcatgggcgcgcggctg
gtgctgttccccaagttcgaccccgacctggtgctggacgtcgtgaagaagcggccggcg
accttcttgccggccgtgccgccgatctacgagcggctggtgcaggccgcggagaagcgg
aaggtctcgctctcgggcatcgacatcgcgatctccggggcgatgagcctcccgcagagc
atcgtcgacctgtgggagtcgaagaccggcggctacctcgtggagggctacggcctgtcc
gagtgctcccccgtcctgatggcgaacccggtcggcgcgacccgcaaggcgggcacggtc
ggcctcccgctgccaggcaccgagctgcgcgtggcggacccggaggacccgtcggtcgac
cgggcgttcggcgaggagggcgagctgctcgcccgcggaccccaggtgttctccggctac
tggcgcaacgccgacgagtcggccaaggtgctcaccgccgacggctggttccgcaccggc
gacatcgtcacgatggacgaggacggcttcgtccgcatcgtggaccggatcaaggagctc
atcgtcaccggcggcttcaacgtctcaccgaccgaagtggaggacgcgctgcgcagcttc
gagggcgtcgcggacgtggccgtggtcggcctcccgcaccgccgcggcggcgaggacgtg
gtcgccgcggtcgtgatggagccgggggcgtcgttcgacgaggcggccatccgcgcctac
ggccgcgactgcctcaccgcgtacaaggtgccgaagcacgtcgtgcaggtggacgagctg
ccgcgcagcatcgtcggcaaggtgatccgccggaaggtgcgcgaccagctcgtcgcgcag
caggaggcggcgggggcctga
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