Leifsonia shinshuensis: F1C12_04905
Help
Entry
F1C12_04905 CDS
T06806
Name
(GenBank) tandem-95 repeat protein
Organism
lse
Leifsonia shinshuensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
Y_Y_Y
DUF8726
Pur_ac_phosph_N
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
QNE34530
UniProt:
A0A7G6Y7R5
LinkDB
All DBs
Position
complement(1016239..1021599)
Genome browser
AA seq
1786 aa
AA seq
DB search
MGSPPHPIPFRGRVSVLVFPVPGDIRVLASLSKWIRERKTLAIATALAVVAGVPLTVAVL
HRGFPVNAVQLDTRDVWVTNGERLLGGRLNHQIDELDAAVTGSSADLDVLQDGSSYFLTD
LPHGTVDRIDPAFVSLGGRIQVPDGSQVGYGGSTLSVLSPTGSLWVLDATGRLDFDKSKT
TPTASVGAGAKLVVAKSGKTFVAAPKGKRLVTVDHPGAAASSASFPVPGSFQLSAVGDHA
VLLDTQADKLVTDSGTTVALPAKGLRIQQPGPDDPAALVATANSLLSVPLAGGTVTSAPA
GATSSGGASAVSAPVRLGTCSYGAWAGSARYLYACDGTKPVGLDIDQQVTGDDLEFRVNH
GVIALNNLRDGNAWVVSSNMRLVQNWAQLKPNDTTVQGDTGEEKPVVQSFADTLAQRTSV
NRPPTAVDDSFGVRPGRSTVLHVLANDTDPDGDVLTITQVSPIPADQGQLALVEGGRAIQ
FTPKDGVTGTVTFRYSIDDGRGGTASANVNATIHLDAQNDPPASTRPSAAQTEVGQSVTY
NVLNDWLDPDGDDLSLVSASATTEDDVRFKPDGDVTFTSKTGQAGSKEVRVTVSDGRKST
TGSLIVTVKPSGTLDPVAVPDFGSGFTGQPVVVHPLDNDQSPSGEPLTLVGATLTGPGSG
RVTADPAHGTLTLTTSAAGEYYAEYTLGAGPKSTTGIVRFDVAQQGATDAPPIAVADRAY
VRPGEPTSVAVLDNDVSPSGRVLVVRQVTPGPGAQDLDVEVLDNAVVKITAPTVLTQQVQ
LQYTVSDGTHEATAGITVIPVPPLVVHQPPVAVDDTVTVRAGDVATASVLDNDSSPDNAP
FSLDPQLRDASAAGKGATAFVSGKTVRYQAPTTPGQYSVVYGITDKYGQKAQATVTFVVT
APDKGSDRAPQPQPLTVRAFAGSSVPIEVPLDGIDPDGDSVVLAGLGSQPTLGRISGTTS
TAFTYEAYPDSAGTDTFTYTVKDTYGKTATGTVNVGVIPRPSQVRPPVAVNDPVQVKPGR
TIAVPVLDNDSDPNGYAIALQKKLLHVDQGLTASVHGKIVLVKAPDREGSYVVRYQITNG
QGGVASAFIQLTVTPDAKDVPPSAVDHVLEADAVSNKSSVKVNALEGAVNPSGLVGDLQV
AVLGPNASAADVGSDGTVTVRPGDRRTAIAYSVTDRVTGLSGDAFIVVPPKGDATAPPRI
KDGLPQQIVPMNGSKSWKLSDILTVPSGRSVKLTGASGVSATNSSGASSFGGDDTLTFSA
LKDYRGPAAITFKVDDGRDAGATSDRITTLVLPLTVGDPEQADVAPTFTSPTEKIEPGEA
PLAVDLRASSYHPNPAILAKLSYSNPQWPNQKIAVSLSGSTLSLSAPLGVQPGESTAVTV
TISSGTHTITGTVNVQVVSSSRPVATQKNPPQTSELKRGSSGTLQGASSDSAWVNPFPGT
PLTITDAQAQSAPSGVTVTHTASSITVSAASGAAIGAVNIVYHVEDATKDPQRTAAAIGQ
YRVTIHDVPAQPPAPSNPSAGDGRASVTIAAPADNGKPIDSYEVSGGESTVTVGAIGRVD
ITGLTNGKSYRFAVRAHNADGWGPVSAQSAAVTPYGTPSKVGGLTITADQYAPATVRMSW
NALRDPDGTGGGAVTYHYRLNNGAWQTTSGTSASEGGKGAGSYSFDVYATNDHSGKAGPT
ASSGSVQVANKPAPQPSIDLAKGNPEPGYAHSYTYDVTLNNFPANRTFPMQVHCNGSTLW
SPSISTDGTGHAHYRGAPDGQQPYCGYPGAYVVVNGVQSSVQNWAQ
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcctccccatccgatcccgttcaggggccgtgttagcgtacttgtgtttcca
gtcccgggggatatcagagtcttggcatcgttgagcaagtggatccgcgagcgcaagacg
ctcgccatcgccactgctctcgccgtcgtcgcaggggtcccgctcacggtcgcggtgctg
caccgcggattcccggtcaacgccgtccagctcgacacccgcgacgtctgggtgacgaac
ggcgagcggctgctcggcggccgcctcaaccatcagatcgacgagctcgacgccgcggtc
accgggtcctccgccgacctggacgtgctgcaggacggctcgtcgtacttcctcaccgac
ctcccgcacgggaccgtcgaccgcatcgacccggcgttcgtgtcgctcggcggccgcatc
caggtgccggacggctcccaggtcggctacggcgggtcgacgctctccgtgctctcgccg
actggctcgctgtgggtgctcgacgccaccggacggctcgacttcgacaaatcgaagacg
acgccgacggcttcggtgggcgctggcgcgaagctggtggtcgcgaagtcggggaagacg
ttcgtcgccgcgccgaagggcaagcggctcgtcacggtcgaccatcccggcgcggcggcg
tcctcggcgtcgttcccggtgccgggctccttccagctttccgcggtcggcgaccatgcg
gtgctgctcgacacgcaggcggacaagctggtcaccgactcgggcacgaccgtcgccctc
ccggcgaagggcctgcggatccagcagcccggccccgacgacccggccgcgctcgtcgcg
acggcgaacagcctgctgagcgtcccgctcgccgggggcacggtgacctcggcacccgcc
ggcgcgacctccagcggaggagcgagcgcggtctccgcaccggtccggctcggcacctgc
tcgtacggggcctgggccgggtccgcccgctacctctacgcctgcgacggcacgaagccg
gtcgggctggacatcgaccagcaggtgaccggcgacgacctggagttccgggtcaaccac
ggcgtcatcgccctcaacaacctgcgcgacgggaacgcctgggtggtgtcctccaacatg
cgcctggtgcagaactgggcgcagctcaagcccaacgacacgaccgtccagggcgacacc
ggcgaggagaagccggtcgtgcagtccttcgcggacaccctcgcgcagcgcacctcggtg
aaccgcccgcccaccgcggtggacgacagcttcggcgtgcggccgggccgctcgaccgtg
ctgcacgtgctggcgaacgacaccgatcccgacggggacgtgctcaccatcacgcaggtc
tcgccgatcccggccgatcaggggcagctcgcgctggtggagggcgggcgcgccatccag
ttcacgccgaaggacggcgtgaccgggacggtgaccttccgctactccatcgacgacggc
cggggcgggacggcgtccgcgaacgtcaacgcgaccatccacctggacgcccagaacgac
ccgccggcgtcgacccggccgagcgcggcccagacggaggtcggccagtcggtgacctac
aacgtgctcaacgactggctggaccccgacggcgacgacctctcgctcgtctccgcgtcc
gccacgaccgaggacgacgtgcggttcaagccggacggcgacgtgacgttcacgagcaag
accggccaggcgggatcgaaggaggtccgcgtcacggtctccgatggccggaagtccacg
accgggagcctgatcgtcacggtgaagccctccggcacgctcgacccggtggccgtgccg
gacttcggctcggggttcaccgggcagcccgtcgtcgtccacccgctggacaacgaccag
tcgccgtcgggggagccgctcaccctggtgggcgcgacgctgacgggaccggggtccggg
cgggtgacggccgatccggcgcacggcacgctcacgctcacgaccagcgcggccggcgag
tactacgccgagtacacgctcggcgccgggcccaagagcacgaccgggatcgtgcgcttc
gacgtcgcgcagcaaggcgccaccgacgcgccgccgatcgcggtcgcggaccgcgcgtac
gtccggccgggcgagccgacctcggtcgccgtgctcgacaacgacgtctcgccgtcgggg
cgcgtcctcgtcgtgcggcaggtgacgccagggccgggagcccaggacctcgacgtggag
gtcctggacaacgcggtggtcaagatcaccgcgccgaccgtgctgacccagcaggtgcag
ctccagtacacggtgtcggacgggacgcacgaggcgacggccgggatcaccgtcatcccg
gtgccgccgctggtcgtgcaccagcctcccgtcgcggtggacgacaccgtgaccgtccgg
gcgggggacgtcgcgaccgcctccgtgctcgacaacgactcgtcgcccgacaacgcgccg
ttctcgctcgacccgcagctgcgcgacgcctccgcggccggcaagggggccacggcgttc
gtgagcggcaagaccgtgcgctaccaggctccgacaacgcccggccagtacagcgtcgtc
tacgggatcaccgacaagtacgggcagaaggcgcaggccaccgtcaccttcgtggtgacc
gccccggacaaggggagcgaccgcgccccgcagccgcagccgctgaccgtgcgcgccttc
gccggctcgtccgtcccgatcgaggtcccgctcgacggcatcgacccggacggcgactcc
gtcgtgctcgccgggctcggcagtcagccgaccctcggccggatctccggcacgaccagc
acggcgttcacgtacgaggcgtacccggactccgcgggcaccgacacgttcacgtacacg
gtgaaggacacctacgggaagaccgcgaccggcaccgtgaacgtcggcgtcatcccgcgg
ccgagccaggtgcggcctcccgtagccgtcaacgacccggtgcaggtcaagcccggccgg
accatcgcggtcccggtgctcgacaacgactcggacccgaacggctatgccatcgctctg
cagaagaagctgctgcacgtggaccagggcctcaccgcgtccgtgcacggcaagatcgtg
ctggtgaaggcgccggaccgcgagggctcctacgtcgtgcggtaccagatcacgaacggc
cagggcggggtcgcgagcgcgttcatccagctcaccgtgaccccggacgccaaagacgtg
ccgccgtccgccgtcgaccacgtgctggaggccgacgccgtctcgaacaagtcgagcgtg
aaggtgaacgcgctggaaggcgcggtcaacccgtccggcctcgtcggggacctccaggtc
gcggtgctcggcccgaacgcgtccgcggccgacgtcgggagcgacggcacggtgaccgtg
cgcccgggcgaccgccggaccgcgatcgcgtactcggtgaccgaccgggtcaccgggctc
agcggcgacgccttcattgtcgttccgcccaagggcgacgcgaccgccccgccgcggatc
aaggacggcctcccgcagcagatcgtgcccatgaacggcagcaagagctggaagctgtcg
gacatcctcaccgtgccgtccggccggagcgtgaagctcaccggcgcgtcgggcgtcagc
gcgacgaacagctcgggcgcgtcgtcgttcggcggcgacgacacgctgaccttcagcgcg
ctgaaggactaccggggtccggccgcgatcaccttcaaggtcgacgacggccgggacgcc
ggggcgacctccgaccgcatcaccacgctcgtcctcccactcaccgtgggcgacccggag
caggcggatgtcgcgccgacgttcacgtcgccgaccgagaagatcgagccgggggaggct
ccgctcgcggtcgacctgcgggcgtcgagctaccacccgaacccggccatcctcgcgaag
ctcagctactcgaacccgcagtggccgaaccagaagatcgccgtctcgctgagcggctcg
acgctgtcgctctccgcgccgctcggcgtccagccgggggagtccaccgccgtgacggtg
acgatcagctcgggcacgcacacgatcaccggcaccgtgaacgtacaggtggtgagttcg
tcgcggccggtggccacccagaagaacccgccgcagacctccgagctgaaacgcgggtcg
agcggcacgctgcagggcgcgtcctcggactcggcgtgggtgaacccgttccccggcaca
cctctgaccatcaccgacgcgcaggcgcagagcgcgccctccggcgtcaccgtcacccac
acggcgagctccatcacggtcagcgctgcctccggtgcggcgatcggcgcggtcaacatc
gtgtaccacgtggaggacgcgacgaaggatccgcagcgcacggccgcggcgatcgggcag
taccgggtcaccatccacgacgtcccggcgcagccgcccgcgccgtcgaacccgtcggcg
ggcgacggccgcgcgagcgtgaccatcgccgccccggccgacaacggcaagccgatcgac
tcctatgaggtcagcggcggcgagagcaccgtcaccgtcggcgcgatcggccgggtggac
atcaccgggctgaccaacggcaagtcgtaccggttcgccgtccgcgcgcacaacgccgac
ggctggggcccggtgtccgcgcagagcgcggcggtcacgccctacgggacgcccagcaag
gtcggcggtctcaccatcacggccgaccagtacgcgccggccacggtgcgcatgagctgg
aacgcgctgcgcgacccggacggcaccggcggcggggcggtgacctaccactaccggctc
aacaacggcgcctggcagacgacatcgggcacgagcgcgtccgagggcggcaagggcgca
ggcagctactcgttcgacgtatacgccacgaacgaccacagcggcaaagccgggccgacg
gcgtcctccggctcggtccaggtcgcgaacaagccggcgccgcagccgtcgatcgacctc
gccaagggcaacccggagccgggctacgcgcacagctacacctacgacgtgacgctgaac
aacttcccggccaaccgcaccttcccgatgcaggtgcactgcaatgggagcacactctgg
tcgccgtccatctccaccgacggcaccgggcacgcccactaccgcggcgcgccggacggc
cagcagccgtactgcgggtaccccggcgcgtacgtcgtcgtgaacggcgtgcagagcagc
gtccagaactgggcgcagtga
DBGET
integrated database retrieval system