Leifsonia shinshuensis: F1C12_05790
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Entry
F1C12_05790 CDS
T06806
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse03420
Nucleotide excision repair
lse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1C12_05790
03430 Mismatch repair
F1C12_05790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_05790
Enzymes [BR:
lse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1C12_05790
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1C12_05790
MMR (mismatch excision repair)
Other MMR factors
F1C12_05790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PAC2
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
QNE34677
UniProt:
A0A7G6Y862
LinkDB
All DBs
Position
complement(1195719..1197458)
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AA seq
579 aa
AA seq
DB search
MSTVTAFGPDGLLAGLDTQQRVAAEALFGPVCVLAGAGTGKTRAITHRIAYGVASGAFTP
NRVMALTFTNRAAAELRGRLRQLGAGGVSARTFHAAALAQLNYFWPQVVGGQLPSVLDGK
GRVLGHAAEKLGLRVDTATLRDVAAEIEWRKVSSMGLEDYAAALASRPLPGTLKAEQLVD
LHKTYEELKDERKQIDFEDVLLVCAGMIETEPSVALQVREQYRYFVVDEYQDVSPLQHDL
LRLWLGTRRDLCVVGDASQTIYSFAGARSEYLLDFERENPGATVVRLEQNYRSAPPVIDT
ANRLMRGRSGALTLHAVHEATARDEVPAPATFDDDRAEARAVAESIAAELAAGARPENIA
VLYRVNVQAAALEQALGDLGISYQLRGSKRFFDLPEVRQAVMTLRAASVAATDEPLFKSV
SDVLRTLGWSVQPPEGRGAVRERWESLNAIMGLVDEMPEGATFRRFTDELMARQAGQHEP
TMSAVTLATLHAAKGLEWDSVYVIGLSEGLVPISYASSFEQIDEERRLLYVGVTRARHRL
RLSWAQRGTQPGRPVSRQASRFLAELAPVRAAREAGRTD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggtgacggcgtttgggcccgacggtctgctggccggcctggacacgcagcag
cgcgtggccgccgaggccctgttcggcccggtctgcgtgctggcgggcgcgggcaccggc
aagacgcgcgcgatcacgcaccggatcgcgtacggcgtcgcctccggcgcgttcacgccg
aaccgcgtgatggcgctgaccttcaccaaccgcgccgccgccgaactgcgggggaggctg
cggcagctcggcgccggcggagtgtcggcccggaccttccacgccgcggcgctggcgcag
ctcaactacttctggccgcaggtggtcggcggtcagctccccagcgtcctcgacggcaag
ggccgcgtgctcgggcacgccgccgagaagctggggctgcgggtggacaccgcgaccctc
cgcgatgtggccgccgagatcgagtggcgcaaggtgtcgagcatggggctggaggactac
gccgcggcgctggcctcccgaccgctgcccggcacgctgaaggccgagcagctggtcgac
ctccacaagacgtacgaagagctgaaggacgagcgcaagcagatcgacttcgaggacgtc
ctgctggtttgcgccgggatgatcgagaccgagccgtcggtcgccctgcaggtgcgcgag
cagtaccgctacttcgtggtggacgagtaccaggacgtctcgccgctgcagcacgacctc
ctccggctgtggctcggcacgcgccgcgacctctgcgtcgtcggcgacgcgagccagacg
atctactcgttcgcgggggcgcgcagcgagtacctgctggacttcgagcgggagaacccg
ggcgcgacggtcgtccggctggagcagaactaccggtcggcgccgccggtgatcgacacc
gccaaccggctgatgcgcggccgctccggcgccctgacgctgcacgccgtccacgaggcc
actgcccgcgacgaggtgccggcgcccgcgacgttcgacgacgaccgggccgaggcgcgc
gccgtcgccgagagcatcgcggccgagctggctgcgggcgcgcgccccgagaacatcgcc
gtgctgtaccgcgtcaatgtgcaggcggcggcgctggagcaggcgctcggcgacctcggg
atcagctaccagctgcgcgggtcgaagcgcttcttcgacctcccggaggtgcgtcaggcc
gtcatgacgctgcgcgcggcgagcgtcgccgccaccgacgagccgctgttcaaatcggtc
agcgacgtgcttcgcaccctcggctggtcggtgcagcctccggagggccgcggcgccgtg
cgcgagcgctgggagtcgctgaacgcgatcatggggctggtggacgagatgccggagggc
gcgaccttccggcgcttcaccgacgagctgatggcccgccaggccggccagcacgagccg
accatgtcggcggtgacgctcgcgaccctccacgccgcgaagggcctggagtgggactcg
gtctacgtgatcgggctctccgagggcctggtgccgatcagctacgcctccagcttcgag
cagatcgacgaggagcgccgcctgctctacgtgggcgtcacgcgtgcgcggcatcggctg
cggctgagctgggcgcagcgcggaacccagccggggcggccggtgtcacggcaggcgtcg
cggttcctggcggagctggcgccggtgcgcgcggcgcgggaggccgggcgaacggactga
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